RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 HEATR5BQ9P2D3 2071 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 TRPC5OSA6NMA1 111 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 PLD2O14939 933 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 SNRNP200O75643 2136 aaKnown RBP14.02□□□□□ -0.16
CD48-203ENST00000613788 TGDSO95455 350 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 TGFB1P01137 390 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 JMJD7P0C870 316 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 CCL4P13236 92 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 HTR6P50406 440 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 EMP3P54852 163 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 RPS13P62277 151 aaKnown RBP14.02□□□□□ -0.16
CD48-203ENST00000613788 CUL3Q13618 768 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 IMPG1Q17R60 797 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 FAM214AQ32MH5 1076 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 TMEM35AQ53FP2 167 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 DEPDC1Q5TB30 811 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 ADNP2Q6IQ32 1131 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 SCIMPQ6UWF3 145 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 TMPRSS7Q7RTY8 843 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 PPP1R3BQ86XI6 285 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 BMPERQ8N8U9 685 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 TTC29Q8NA56 475 aaPredicted RBP14.02□□□□□ -0.16
CD48-203ENST00000613788 SRFBP1Q8NEF9 429 aaKnown RBP14.02□□□□□ -0.16
CD48-203ENST00000613788 OR1L3Q8NH93 324 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 ZNF317Q96PQ6 595 aaPredicted RBP14.02□□□□□ -0.16
CD48-203ENST00000613788 MS4A8Q9BY19 250 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 REXO4Q9GZR2 422 aaKnown RBP14.02□□□□□ -0.16
CD48-203ENST00000613788 SPRTNQ9H040 489 aaPredicted RBP14.02□□□□□ -0.16
CD48-203ENST00000613788 SYNPO2LQ9H987 977 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 SLC39A1Q9NY26 324 aa14.02□□□□□ -0.16
CD48-203ENST00000613788 FITM1A5D6W6 292 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 GMNCA6NCL1 334 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 LRIT2A6NDA9 550 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 PIP5K1BO14986 540 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 RGS14O43566 566 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 SKAP2O75563 359 aaPredicted RBP14.01□□□□□ -0.17
CD48-203ENST00000613788 LINC00032P0C843 101 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 FGF5P12034 268 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 RAB15P59190 212 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 TGM3Q08188 693 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 PDCD2Q16342 344 aaPredicted RBP14.01□□□□□ -0.17
CD48-203ENST00000613788 NDUFA9Q16795 377 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 HKDC1Q2TB90 917 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 PRTGQ2VWP7 1150 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 YOD1Q5VVQ6 348 aaPredicted RBP14.01□□□□□ -0.17
CD48-203ENST00000613788 GARNL3Q5VVW2 1013 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 KHDRBS2Q5VWX1 349 aaKnown RBP14.01□□□□□ -0.17
CD48-203ENST00000613788 LRRC34Q8IZ02 419 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 RNF175Q8N4F7 328 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 HBEGFQ99075 208 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 MACROD1Q9BQ69 325 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 ZPBPQ9BS86 351 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 SLC6A16Q9GZN6 736 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 TUBB1Q9H4B7 451 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 STARD5Q9NSY2 213 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 FGFR1OP2Q9NVK5 253 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 RIC8BQ9NVN3 520 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 AHSPQ9NZD4 102 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 VPS29Q9UBQ0 182 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 SLC12A4Q9UP95 1085 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 RUVBL1Q9Y265 456 aaKnown RBP14.01□□□□□ -0.17
CD48-203ENST00000613788 USH1CQ9Y6N9 552 aa14.01□□□□□ -0.17
CD48-203ENST00000613788 HYKKA2RU49 373 aa14□□□□□ -0.17
CD48-203ENST00000613788 P2RX6O15547 441 aa14□□□□□ -0.17
CD48-203ENST00000613788 STATHP02808 62 aa14□□□□□ -0.17
CD48-203ENST00000613788 CTSBP07858 339 aa14□□□□□ -0.17
CD48-203ENST00000613788 TROVE2P10155 538 aaKnown RBP eCLIP14□□□□□ -0.17
CD48-203ENST00000613788 RAP1GDS1P52306 607 aa14□□□□□ -0.17
CD48-203ENST00000613788 ARFIP1P53367 373 aa14□□□□□ -0.17
CD48-203ENST00000613788 ARSFP54793 590 aa14□□□□□ -0.17
CD48-203ENST00000613788 BTKQ06187 659 aa14□□□□□ -0.17
CD48-203ENST00000613788 HYAL2Q12891 473 aa14□□□□□ -0.17
CD48-203ENST00000613788 ADPRMQ3LIE5 342 aa14□□□□□ -0.17
CD48-203ENST00000613788 LARP7Q4G0J3 582 aaKnown RBP eCLIP14□□□□□ -0.17
CD48-203ENST00000613788 TOR1AIP1Q5JTV8 583 aa14□□□□□ -0.17
CD48-203ENST00000613788 DCAF12Q5T6F0 453 aa14□□□□□ -0.17
CD48-203ENST00000613788 CEACAM20Q6UY09 585 aa14□□□□□ -0.17
CD48-203ENST00000613788 ABHD13Q7L211 337 aa14□□□□□ -0.17
CD48-203ENST00000613788 KCT2Q8NC54 265 aa14□□□□□ -0.17
CD48-203ENST00000613788 OR2L5Q8NG80 312 aa14□□□□□ -0.17
CD48-203ENST00000613788 RGMAQ96B86 450 aa14□□□□□ -0.17
CD48-203ENST00000613788 C19orf60Q96EN9 201 aa14□□□□□ -0.17
CD48-203ENST00000613788 F2RL3Q96RI0 385 aa14□□□□□ -0.17
CD48-203ENST00000613788 TAAR9Q96RI9 348 aa14□□□□□ -0.17
CD48-203ENST00000613788 SIKE1Q9BRV8 207 aa14□□□□□ -0.17
CD48-203ENST00000613788 NDC1Q9BTX1 674 aa14□□□□□ -0.17
CD48-203ENST00000613788 TRIM55Q9BYV6 548 aa14□□□□□ -0.17
CD48-203ENST00000613788 NUF2Q9BZD4 464 aa14□□□□□ -0.17
CD48-203ENST00000613788 ASPSCR1Q9BZE9 553 aa14□□□□□ -0.17
CD48-203ENST00000613788 ACPTQ9BZG2 426 aa14□□□□□ -0.17
CD48-203ENST00000613788 SLC7A5P2Q9GIP4 190 aa14□□□□□ -0.17
CD48-203ENST00000613788 OR51B5Q9H339 312 aa14□□□□□ -0.17
CD48-203ENST00000613788 SLC22A7Q9Y694 548 aa14□□□□□ -0.17
CD48-203ENST00000613788 SPEGQ15772 3267 aa14□□□□□ -0.17
CD48-203ENST00000613788 COL27A1Q8IZC6 1860 aaPredicted RBP14□□□□□ -0.17
CD48-203ENST00000613788 FAM149AA5PLN7 773 aa14□□□□□ -0.17
CD48-203ENST00000613788 H3BMH7 237 aa14□□□□□ -0.17
CD48-203ENST00000613788 VPS4BO75351 444 aa14□□□□□ -0.17
CD48-203ENST00000613788 RSL1D1O76021 490 aaKnown RBP14□□□□□ -0.17
CD48-203ENST00000613788 SEMA3DO95025 777 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms