RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ATG5Q9H1Y0 275 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 TCEAL2Q9H3H9 227 aaPredicted RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 DLGAP4Q9Y2H0 992 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 NUDT14O95848 222 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SCARB2Q14108 478 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 DOK7Q18PE1 504 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 TMEM200AQ86VY9 491 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 RAVER1Q8IY67 606 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 OR52J3Q8NH60 311 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 OMDQ99983 421 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ACBD6Q9BR61 282 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 CDT1Q9H211 546 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 DNAJC13O75165 2243 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 PTPRMP28827 1452 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 A0A0U1RQJ8 604 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ABHD14A-ACY1A0A1B0GW23 586 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 hCG_2039718K7EN88 272 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 HTR3BO95264 441 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 GLP1RP43220 463 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 TRMT11Q7Z4G4 463 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 GALNTL5Q7Z4T8 443 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ZBTB2Q8N680 514 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 OR5T1Q8NG75 326 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 PIWIL1Q96J94 861 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 EBF4Q9BQW3 602 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ABCG4Q9H172 646 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 PDGFAP04085 211 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 THP07101 528 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 HSD3B1P14060 373 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 AFF3P51826 1226 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 EMX2Q04743 252 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ORC1Q13415 861 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 HSDL1Q3SXM5 330 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 BLOC1S3Q6QNY0 202 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 LRRC28Q86X40 367 aaPredicted RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 RASGEF1AQ8N9B8 481 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SLC29A1Q99808 456 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 LIN28AQ9H9Z2 209 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 SGK2Q9HBY8 427 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 RPS10P5Q9NQ39 176 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 FBXL4Q9UKA2 621 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ADAMTS6Q9UKP5 1117 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SLX4Q8IY92 1834 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 CNTNAP1P78357 1384 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 CAPN5O15484 640 aaPredicted RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 TLX3O43711 291 aaPredicted RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 CREG1O75629 220 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 TAS2R40P59535 323 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 RPS14P62263 151 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 SUSD4Q5VX71 490 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ZNF627Q7L945 461 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 TMCO2Q7Z6W1 182 aaPredicted RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 C17orf64Q86WR6 236 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ADAMTS15Q8TE58 950 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 TIGARQ9NQ88 270 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 NANSQ9NR45 359 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 INPP5EQ9NRR6 644 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ASF1BQ9NVP2 202 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 CDC14AQ9UNH5 594 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 A8MXE2 369 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 BANF1O75531 89 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SLC7A5P1Q8MH63 180 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 KCNJ9Q92806 393 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 TMEM39BQ9GZU3 492 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 CYP8B1Q9UNU6 501 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ADAM18Q9Y3Q7 739 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 XRN1Q8IZH2 1706 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 ASCC3Q8N3C0 2202 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 ACOT7O00154 380 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 FAM136AQ96C01 138 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 KCNC2Q96PR1 638 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 EPYCQ99645 322 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 BTBD2Q9BX70 525 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 PCDHAC1Q9H158 963 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SMOXQ9NWM0 555 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 C14orf119Q9NWQ9 140 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 FAM118AQ9NWS6 357 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ABI2Q9NYB9 513 aaPredicted RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 SLC35F4A4IF30 521 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 RNF212BA8MTL3 300 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 EPHB6O15197 1021 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ATG13O75143 517 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 LYPLA2O95372 231 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 IL1AP01583 271 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ARHGAP1Q07960 439 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 LPCAT3Q6P1A2 487 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SLC51BQ86UW2 128 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 CARNMT1Q8N4J0 409 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SMPDL3AQ92484 453 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 B3GNT5Q9BYG0 378 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 TKTL2Q9H0I9 626 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SENP2Q9HC62 589 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SH2B3Q9UQQ2 575 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 LOC100509620A0A075B734 347 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 PHYHO14832 338 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 SEC14L5O43304 696 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 PRKCGP05129 697 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 DUSP6Q16828 381 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TATDN3Q17R31 274 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 SCGB2B2Q4G0G5 96 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms