RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 SOX13Q9UN79 622 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 A0A1B0GTH9 108 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 ZNF839A8K0R7 811 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 E5RI56 91 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 PRRG2O14669 202 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 NDC80O14777 642 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 KIF5CO60282 957 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 OGNP20774 298 aaKnown RBP21.97■■□□□ 1.11
MMP28-203ENST00000612672 NPY2RP49146 381 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 BASP1P80723 227 aaKnown RBP21.97■■□□□ 1.11
MMP28-203ENST00000612672 KIAA0930Q6ICG6 404 aaPredicted RBP21.97■■□□□ 1.11
MMP28-203ENST00000612672 CEP128Q6ZU80 1094 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 PIWIL4Q7Z3Z4 852 aaKnown RBP21.97■■□□□ 1.11
MMP28-203ENST00000612672 KIAA1328Q86T90 577 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 RPS19BP1Q86WX3 136 aaKnown RBP21.97■■□□□ 1.11
MMP28-203ENST00000612672 TMEM139Q8IV31 216 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 SYCE1Q8N0S2 351 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 LGI4Q8N135 537 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 FAM98AQ8NCA5 519 aaKnown RBP21.97■■□□□ 1.11
MMP28-203ENST00000612672 TCF12Q99081 682 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 EBNA1BP2Q99848 306 aaKnown RBP21.97■■□□□ 1.11
MMP28-203ENST00000612672 FRMD8P1Q9BZ68 369 aaPredicted RBP21.97■■□□□ 1.11
MMP28-203ENST00000612672 ANKHQ9HCJ1 492 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 BFARQ9NZS9 450 aa21.97■■□□□ 1.11
MMP28-203ENST00000612672 FAM90A27PA6NNH2 459 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 MAGEB17A8MXT2 336 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 FANCGO15287 622 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 AVILO75366 819 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 IPO7O95373 1038 aaKnown RBP21.96■■□□□ 1.11
MMP28-203ENST00000612672 HOXB4P17483 251 aaPredicted RBP21.96■■□□□ 1.11
MMP28-203ENST00000612672 MEOX1P50221 254 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 ITGA8P53708 1063 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 OR4D2P58180 307 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 OLR1P78380 273 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 ACTN3Q08043 901 aaPredicted RBP21.96■■□□□ 1.11
MMP28-203ENST00000612672 DENND6AQ8IWF6 608 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 FAM57AQ8TBR7 257 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 TRIM45Q9H8W5 580 aaPredicted RBP21.96■■□□□ 1.11
MMP28-203ENST00000612672 RNF6Q9Y252 685 aa21.96■■□□□ 1.11
MMP28-203ENST00000612672 FLNAP21333 2647 aaKnown RBP21.96■■□□□ 1.11
MMP28-203ENST00000612672 TOXO94900 526 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 TPOP07202 933 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 MPC1LP0DKB6 136 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 CD1EP15812 388 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 MLF1P58340 268 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 RPS6KA1Q15418 735 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 CMPK2Q5EBM0 449 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 SEL1L2Q5TEA6 688 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 ASPGQ86U10 573 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 MCOLN3Q8TDD5 553 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 CCDC177Q9NQR7 707 aaPredicted RBP21.95■■□□□ 1.1
MMP28-203ENST00000612672 FBXO6Q9NRD1 293 aaPredicted RBP21.95■■□□□ 1.1
MMP28-203ENST00000612672 ADAMTS6Q9UKP5 1117 aa21.95■■□□□ 1.1
MMP28-203ENST00000612672 PTGS2P35354 604 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 TERF1P54274 439 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 TAS2R50P59544 299 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 EMC4Q5J8M3 183 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 UBE2R2Q712K3 238 aaPredicted RBP21.94■■□□□ 1.1
MMP28-203ENST00000612672 CPNE9Q8IYJ1 553 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 AFAP1L2Q8N4X5 818 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 HORMAD2Q8N7B1 307 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 CD200R1Q8TD46 325 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 GPR21Q99679 349 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 TMUB1Q9BVT8 246 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 COQ3Q9NZJ6 369 aa21.94■■□□□ 1.1
MMP28-203ENST00000612672 HS6ST1O60243 411 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 FHP07954 510 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 CDH1P12830 882 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 MSX1P28360 303 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 MEF2AQ02078 507 aaPredicted RBP21.93■■□□□ 1.1
MMP28-203ENST00000612672 ZNF470Q6ECI4 717 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 NEPROQ6NW34 567 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 EML6Q6ZMW3 1958 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 CCDC71Q8IV32 467 aaPredicted RBP21.93■■□□□ 1.1
MMP28-203ENST00000612672 SULF2Q8IWU5 870 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 DMRTC2Q8IXT2 367 aaPredicted RBP21.93■■□□□ 1.1
MMP28-203ENST00000612672 CAMKVQ8NCB2 501 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 ZNF740Q8NDX6 193 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 NFAM1Q8NET5 270 aaPredicted RBP21.93■■□□□ 1.1
MMP28-203ENST00000612672 SLC13A3Q8WWT9 602 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 OR1F2PQ96R84 312 aa21.93■■□□□ 1.1
MMP28-203ENST00000612672 DRG1Q9Y295 367 aaKnown RBP21.93■■□□□ 1.1
MMP28-203ENST00000612672 CTAGE15A4D2H0 777 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 TFECO14948 347 aaPredicted RBP21.92■■□□□ 1.1
MMP28-203ENST00000612672 NADKO95544 446 aaPredicted RBP21.92■■□□□ 1.1
MMP28-203ENST00000612672 TFEBP19484 476 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 DNAJA1P31689 397 aaKnown RBP21.92■■□□□ 1.1
MMP28-203ENST00000612672 TRHRP34981 398 aaPredicted RBP21.92■■□□□ 1.1
MMP28-203ENST00000612672 CYB561P49447 251 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 BTG2P78543 158 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 CTBP1Q13363 440 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 CAPN13Q6MZZ7 669 aaPredicted RBP21.92■■□□□ 1.1
MMP28-203ENST00000612672 CTAGE6Q86UF2 777 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 THAP11Q96EK4 314 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 ATG10Q9H0Y0 220 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 INTS10Q9NVR2 710 aaKnown RBP21.92■■□□□ 1.1
MMP28-203ENST00000612672 DHRS7Q9Y394 339 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 SLC22A7Q9Y694 548 aa21.92■■□□□ 1.1
MMP28-203ENST00000612672 ZBTB14O43829 449 aa21.91■■□□□ 1.1
MMP28-203ENST00000612672 CDC40O60508 579 aaKnown RBP eCLIP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms