RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 IKZF3Q9UKT9 509 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ACSL6Q9UKU0 697 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 TMCO1Q9UM00 188 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PDE10AQ9Y233 779 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SDK2Q58EX2 2172 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ADAMTS20P59510 1910 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SLC9B1P1A6NJY1 282 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SYCE1LA8MT33 242 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 C9orf172C9J069 976 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 E7ENX8 843 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 STX16-NPEPL1H3BU86 382 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 UBXN8O00124 270 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 STX16O14662 325 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 AIM2O14862 343 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SKAP2O75563 359 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PDE5AO76074 875 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SLC16A8O95907 504 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 MSL3P1P0C860 447 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ST6GAL1P15907 406 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 IMPA1P29218 277 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SLC5A2P31639 672 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 NUDT2P50583 147 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PCBP4P57723 403 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SESN3P58005 492 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SH3BP2P78314 561 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 TAP2Q03519 686 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 FOXM1Q08050 763 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SF1Q15637 639 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PIGGQ5H8A4 983 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 KANK2Q63ZY3 851 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ADAMTSL2Q86TH1 951 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PROSER1Q86XN7 944 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 HPS6Q86YV9 775 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SYTL1Q8IYJ3 562 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 C2orf73Q8N5S3 287 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 LMNTD1Q8N9Z9 388 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SNIP1Q8TAD8 396 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ZNF480Q8WV37 535 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ZCCHC14Q8WYQ9 949 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ZUFSPQ96AP4 578 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 RCN3Q96D15 328 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 TCTN2Q96GX1 697 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 FCRL4Q96PJ5 515 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 OR6C1Q96RD1 312 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 EFCAB1Q9HAE3 211 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 FANCEQ9HB96 536 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SOHLH2Q9NX45 425 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 UTP6Q9NYH9 597 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 RARRES3Q9UL19 164 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 G3BP2Q9UN86 482 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 MDC1Q14676 2089 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 A0A1W2PPV9 198 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 KRT87PA6NCN2 255 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 UBDO15205 165 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 PRAMEF10O60809 474 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 SORBS2O94875 1100 aaKnown RBP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 CCNDBP1O95273 360 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 SIX3O95343 332 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 RPS17P08708 135 aaKnown RBP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 EBLN1P0CF75 366 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 FGF5P12034 268 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 FOLR1P15328 257 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 CDKL1Q00532 357 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 LCP2Q13094 533 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 FASTKQ14296 549 aaKnown RBP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 MAPRE2Q15555 327 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 PHKG1Q16816 387 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 PFKFB4Q16877 469 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 MUM1Q2TAK8 710 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 CLEC6AQ6EIG7 209 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 SBSNQ6UWP8 590 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 BNC2Q6ZN30 1099 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 TRIM73Q86UV7 250 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 PPP1R3BQ86XI6 285 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 LRRC56Q8IYG6 542 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 C19orf47Q8N9M1 422 aaKnown RBP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 ZNF248Q8NDW4 579 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 OR2A1Q8NGT9 310 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 OR8K5Q8NH50 307 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 ATL1Q8WXF7 558 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 C19orf60Q96EN9 201 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 MARK4Q96L34 752 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 SERPINI1Q99574 410 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 PCBD2Q9H0N5 130 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 APMAPQ9HDC9 416 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 BATF3Q9NR55 127 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 FGF21Q9NSA1 209 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 ARL15Q9NXU5 204 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 STOX2Q9P2F5 926 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-217ENST00000611848 RNF112Q9ULX5 631 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 OARD1Q9Y530 152 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 PCDHGA10Q9Y5H3 936 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 B3GALT1Q9Y5Z6 326 aa8.46□□□□□ -1.06
SMAD4-217ENST00000611848 EPG5Q9HCE0 2579 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 FRYQ5TBA9 3013 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 LRRC14BA6NHZ5 514 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 SUPT3HB4E1H0 165 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms