RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 TREX1Q9NSU2 369 aa16.28■□□□□ 0.2
CHMP4A-211ENST00000609024 DNAJB12Q9NXW2 375 aaKnown RBP16.28■□□□□ 0.2
CHMP4A-211ENST00000609024 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
CHMP4A-211ENST00000609024 NAALAD2Q9Y3Q0 740 aa16.28■□□□□ 0.2
CHMP4A-211ENST00000609024 GRID2IPA4D2P6 1211 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 GOLGA8KD6RF30 607 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 GOLGA8TH3BQL2 631 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 PDE9AO76083 593 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 HOXD4P09016 255 aaPredicted RBP16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 TFEBP19484 476 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 KLK2P20151 261 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 RFC3P40938 356 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 HLCSP50747 726 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 MPP1Q00013 466 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 RHAGQ02094 409 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 PMPCAQ10713 525 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 GBX1Q14549 363 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 KCNJ11Q14654 390 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 ZNF468Q5VIY5 522 aaPredicted RBP16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 VN1R4Q7Z5H5 301 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 KIAA1328Q86T90 577 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 SULF2Q8IWU5 870 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 REXO1L1PQ8IX06 675 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 KIF2BQ8N4N8 673 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 TMEM156Q8N614 296 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 ELP5Q8TE02 316 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 NRGNQ92686 78 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 DEFB126Q9BYW3 111 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 PCBD2Q9H0N5 130 aa16.27■□□□□ 0.2
CHMP4A-211ENST00000609024 SPG11Q96JI7 2443 aa16.27■□□□□ 0.19
CHMP4A-211ENST00000609024 TCRBV7S2A1N4TA0A589 114 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 ZNF860A6NHJ4 632 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 BTNL10A8MVZ5 291 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 LIASO43766 372 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 PEX1O43933 1283 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 TOXO94900 526 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 FHP07954 510 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 PAMP19021 973 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 ADARP55265 1226 aaKnown RBP16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 MLF1P58340 268 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 MEF2AQ02078 507 aaPredicted RBP16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 HERC3Q15034 1050 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 C17orf64Q86WR6 236 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 CCDC71Q8IV32 467 aaPredicted RBP16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 MARVELD2Q8N4S9 558 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 LRRC57Q8N9N7 239 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 KCT2Q8NC54 265 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 FBXO15Q8NCQ5 510 aaPredicted RBP16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 ARMC2Q8NEN0 867 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 TBC1D20Q96BZ9 403 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 SLC6A16Q9GZN6 736 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 CCM2LQ9NUG4 571 aaPredicted RBP16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 SCN3AQ9NY46 2000 aa16.26■□□□□ 0.19
CHMP4A-211ENST00000609024 FAM237BA0A1B0GVD1 139 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 CTAGE9A4FU28 777 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 ETS1P14921 441 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 TRHRP34981 398 aaPredicted RBP16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 BASP1P80723 227 aaKnown RBP16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 SNX1Q13596 522 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 TYSND1Q2T9J0 566 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 CAPN13Q6MZZ7 669 aaPredicted RBP16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 NIPAL1Q6NVV3 410 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 SLC26A11Q86WA9 606 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 CYP4Z2PQ8N1L4 340 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 ALKBH8Q96BT7 664 aaKnown RBP16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 PTCHD1Q96NR3 888 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 POLDIP3Q9BY77 421 aaKnown RBP16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 TSGA10Q9BZW7 698 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 GALPQ9UBC7 116 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 SLC22A7Q9Y694 548 aa16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 INTS1Q8N201 2190 aaKnown RBP16.25■□□□□ 0.19
CHMP4A-211ENST00000609024 HCFC1P51610 2035 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 ABCA2Q9BZC7 2435 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 FEZF1A0PJY2 475 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 ACOT7O00154 380 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 PSMD12O00232 456 aaPredicted RBP16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 B4GALT2O60909 372 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 FTCDO95954 541 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 SERPIND1P05546 499 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 MPC1LP0DKB6 136 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 ENO3P13929 434 aaPredicted RBP16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 OGNP20774 298 aaKnown RBP16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 DNASE1P24855 282 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 TBPL1P62380 186 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 SNRPNP63162 240 aaKnown RBP16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 PLGLB1Q02325 96 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 TFF3Q07654 80 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 CUL1Q13616 776 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 OASLQ15646 514 aaKnown RBP16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 CEBPEQ15744 281 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 CES3Q6UWW8 571 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 UBE2R2Q712K3 238 aaPredicted RBP16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 PRUNE1Q86TP1 453 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 PDSS2Q86YH6 399 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 PALM2Q8IXS6 379 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 TXLNBQ8N3L3 684 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 TBC1D19Q8N5T2 526 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 PRELID2Q8N945 189 aa16.24■□□□□ 0.19
CHMP4A-211ENST00000609024 RNF214Q8ND24 703 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms