RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 FAM46DQ8NEK8 389 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 VPS37AQ8NEZ2 397 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 NT5CQ8TCD5 201 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 GTF2H4Q92759 462 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 NELL1Q92832 810 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 VPS33AQ96AX1 596 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 RGMAQ96B86 450 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 COQ8BQ96D53 544 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TSSK3Q96PN8 268 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 OR52E6Q96RD3 313 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 BHLHE41Q9C0J9 482 aaPredicted RBP11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 CHRNA10Q9GZZ6 450 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 RAB33BQ9H082 229 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ABCG4Q9H172 646 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 DDX31Q9H8H2 851 aaKnown RBP11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PRDM9Q9NQV7 894 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 SPHK1Q9NYA1 384 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ACTR10Q9NZ32 417 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 BTNL2Q9UIR0 455 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PCDHA9Q9Y5H5 950 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 SLCO1B1Q9Y6L6 691 aa11.76□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 KMT2EQ8IZD2 1858 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TRBV5-3A0A0A0MS03 114 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 A0A0J9YY10 115 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 GNG14A0A1W2PPG7 69 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PLPP1O14494 284 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ZW10O43264 779 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 GUCY1B2O75343 617 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PIAS2O75928 621 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 STAMBPO95630 424 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TBX6O95947 436 aaPredicted RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TGFB1P01137 390 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ANXA6P08133 673 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ZCCHC18P0CG32 403 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 UGT2B7P16662 529 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 HOXB9P17482 250 aaPredicted RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 CTSKP43235 329 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 SLC7A2P52569 658 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 STXBP1P61764 594 aaKnown RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 MEF2AQ02078 507 aaPredicted RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 UGT8Q16880 541 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PAGE3Q5JUK9 113 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 KIAA1614Q5VZ46 1190 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 FAM71E1Q6IPT2 247 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ADNP2Q6IQ32 1131 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ZFP1Q6P2D0 407 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ADCK2Q7Z695 626 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PTRH1Q86Y79 214 aaKnown RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 HPS6Q86YV9 775 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 C1orf210Q8IVY1 113 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 SLC15A3Q8IY34 581 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TMEFF1Q8IYR6 380 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TMEM132CQ8N3T6 1108 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ZCCHC7Q8N3Z6 543 aaKnown RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 FBXL6Q8N531 539 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 C2orf73Q8N5S3 287 aaPredicted RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TNIP2Q8NFZ5 429 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 WDR60Q8WVS4 1066 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TMEM125Q96AQ2 219 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ZC3H10Q96K80 434 aaKnown RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 CLPTM1LQ96KA5 538 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 CCDC115Q96NT0 180 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PHF12Q96QT6 1004 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 CGREF1Q99674 301 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TBCDQ9BTW9 1192 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ZNF717Q9BY31 904 aaPredicted RBP11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ROGDIQ9GZN7 287 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 MIR1-1HGQ9H1L0 117 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 OR51B5Q9H339 312 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 REEP4Q9H6H4 257 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ADA2Q9NZK5 511 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 POMT2Q9UKY4 750 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 DOLKQ9UPQ8 538 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 L3MBTL1Q9Y468 752 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 GON4LQ3T8J9 2241 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TRIOO75962 3097 aa11.75□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 LRIT2A6NDA9 550 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 URADA6NGE7 173 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 A8MUI8 341 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 RNASET2O00584 256 aaKnown RBP11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ACOT8O14734 319 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 HAT1O14929 419 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 SCAMP1O15126 338 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 NOBOXO60393 691 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PDE5AO76074 875 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 COX7A2P14406 83 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 HOXB6P17509 224 aaKnown RBP11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 PPIBP23284 216 aaKnown RBP11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 HTR1EP28566 365 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 TPP2P29144 1249 aaPredicted RBP11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 BSGP35613 385 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 BCL6P41182 706 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 FNTBP49356 437 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 ARRB1P49407 418 aaPredicted RBP11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 RGS1Q08116 209 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 DMWDQ09019 674 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 FLOT2Q14254 428 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 NR1D2Q14995 579 aa11.74□□□□□ -0.53
NEDD8-MDP1-203ENST00000604306 HEPACAMQ14CZ8 416 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms