RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 PEX11GQ96HA9 241 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 EBNA1BP2Q99848 306 aaKnown RBP11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TTYH2Q9BSA4 534 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ANKHQ9HCJ1 492 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 DMRT3Q9NQL9 472 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 FAM114A2Q9NRY5 505 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 LANCL2Q9NS86 450 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ANAPC5Q9UJX4 755 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 INTUQ9ULD6 942 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 RIMKLBQ9ULI2 386 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 FAM215AQ9Y5M1 114 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 A0A0G2JNJ9 132 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 FIGNL2A6NMB9 653 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 A6NNC1 897 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 H7BY64 318 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 FCHO1O14526 889 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PSMD3O43242 534 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 MBD3O95983 291 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 RAF1P04049 648 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GLI4P10075 376 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 UQCRC1P31930 480 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PTPN7P35236 360 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZFP36L2P47974 494 aaKnown RBP11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 HADHBP55084 474 aaKnown RBP11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GDF10P55107 478 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 EIF3BP55884 814 aaKnown RBP11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 MPP1Q00013 466 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 KEAP1Q14145 624 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TYSND1Q2T9J0 566 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 SLC25A35Q3KQZ1 300 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CTSL3PQ5NE16 218 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 THEMIS2Q5TEJ8 643 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 MEI1Q5TIA1 1274 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 C11orf63Q6NUN7 778 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 B3GNT6Q6ZMB0 384 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PPP1R21Q6ZMI0 780 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CXXC5Q7LFL8 322 aaKnown RBP11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 MDGA2Q7Z553 956 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CYP4X1Q8N118 509 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CYP4Z2PQ8N1L4 340 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PLPP5Q8NEB5 264 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 OR5T3Q8NGG3 340 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 SPATA3Q8NHX4 192 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZNF480Q8WV37 535 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 SLCO2A1Q92959 643 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CCDC138Q96M89 665 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PRAP1Q96NZ9 151 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GBP4Q96PP9 640 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PKP4Q99569 1192 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ATG10Q9H0Y0 220 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ABHD10Q9NUJ1 306 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 Q9UFV3 132 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 EFR3BQ9Y2G0 817 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 NAALAD2Q9Y3Q0 740 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 DUSP10Q9Y6W6 482 aa11□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZNF839A8K0R7 811 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 E7ENX8 843 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CD3EAPO15446 510 aaKnown RBP10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 NDUFS3O75489 264 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TJP3O95049 919 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 SLC16A8O95907 504 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 NUDT7P0C024 238 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ADRA1DP25100 572 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PCSK6P29122 969 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ATP5DP30049 168 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 HOXC12P31275 282 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CTNNA1P35221 906 aaKnown RBP10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 HSD17B2P37059 387 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ADH7P40394 386 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GRIA1P42261 906 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PPIAP62937 165 aaKnown RBP10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TAP2Q03519 686 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 AADACL2Q6P093 401 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PAOXQ6QHF9 649 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 LRRC6Q86X45 466 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 KCT2Q8NC54 265 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CREB3L4Q8TEY5 395 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 OR1F2PQ96R84 312 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 SMC6Q96SB8 1091 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 DEFB126Q9BYW3 111 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZNF395Q9H8N7 513 aaPredicted RBP10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CBLCQ9ULV8 474 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TCAF1Q9Y4C2 921 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GTF3C3Q9Y5Q9 886 aa10.99□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PINLYPA6NC86 204 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 SAGE2PA6NJ88 616 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 BCKDKO14874 412 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 KIF5CO60282 957 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 NIPSNAP2O75323 286 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PSIP1O75475 530 aaKnown RBP10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 LY6G6DO95868 133 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 SYF2O95926 243 aaKnown RBP10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CATP04040 527 aaKnown RBP10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 FHP07954 510 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 IL10P22301 178 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 RPS3P23396 243 aaKnown RBP eCLIP10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 RPS15AP62244 130 aaKnown RBP10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PLGLB1Q02325 96 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TRIM14Q14142 442 aa10.98□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GBX1Q14549 363 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms