RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 GALNT1Q10472 559 aaPredicted RBP20.42■□□□□ 0.86
SH3D19-211ENST00000604030 LSAMPQ13449 338 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 ARFRP1Q13795 201 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 PYHIN1Q6K0P9 492 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 SLC44A3Q8N4M1 653 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 ZNF675Q8TD23 568 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 COQ8BQ96D53 544 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 MUS81Q96NY9 551 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 ERI3O43414 337 aaKnown RBP20.42■□□□□ 0.86
SH3D19-211ENST00000604030 PRKYO43930 277 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 GET4Q7L5D6 327 aaPredicted RBP20.42■□□□□ 0.86
SH3D19-211ENST00000604030 CHERPQ8IWX8 916 aaKnown RBP20.42■□□□□ 0.86
SH3D19-211ENST00000604030 OR52E4Q8NGH9 312 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 ACTR6Q9GZN1 396 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 ENAMQ9NRM1 1142 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 HCN3Q9P1Z3 774 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 SETD1AO15047 1707 aaKnown RBP20.42■□□□□ 0.86
SH3D19-211ENST00000604030 ADAMTS3O15072 1205 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 MS4A13Q5J8X5 152 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 HFE2Q6ZVN8 426 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 LPIN3Q9BQK8 851 aa20.42■□□□□ 0.86
SH3D19-211ENST00000604030 I3L521 148 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 CNTN5O94779 1100 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 SOX30O94993 753 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 TBX5Q99593 518 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ZNF304Q9HCX3 659 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 SCP2D1Q9UJQ7 156 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 IFT52Q9Y366 437 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 PSAT1Q9Y617 370 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ZNF208O43345 1280 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ALDOAP04075 364 aaKnown RBP20.41■□□□□ 0.86
SH3D19-211ENST00000604030 AHCYP23526 432 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 DCUN1D3Q8IWE4 304 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 SH3RF2Q8TEC5 729 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 OR2B2Q9GZK3 357 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 TAS2R10Q9NYW0 307 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 SIX4Q9UIU6 781 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 DISC1C4P0D8 188 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 INMT-MINDY4F8WBC2 141 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ACVRL1P37023 503 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 PRSS55Q6UWB4 352 aaPredicted RBP20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ZNF598Q86UK7 904 aaKnown RBP20.41■□□□□ 0.86
SH3D19-211ENST00000604030 AKAP1Q92667 903 aaKnown RBP eCLIP20.41■□□□□ 0.86
SH3D19-211ENST00000604030 SLC38A3Q99624 504 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ASPNQ9BXN1 380 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ADAM7Q9H2U9 754 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 RANBP3Q9H6Z4 567 aaPredicted RBP20.41■□□□□ 0.86
SH3D19-211ENST00000604030 Q9N2J8 555 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ALPIP09923 528 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 HSD17B1P14061 328 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 MPP2Q14168 576 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ZMYND11Q15326 602 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 PIGGQ5H8A4 983 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 TMEM135Q86UB9 458 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 ING5Q8WYH8 240 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 SLC7A6OSQ96CW6 309 aaPredicted RBP20.41■□□□□ 0.86
SH3D19-211ENST00000604030 SMOQ99835 787 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 TMED9Q9BVK6 235 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 RBPJLQ9UBG7 517 aa20.41■□□□□ 0.86
SH3D19-211ENST00000604030 A0A1B0GVC2 190 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 NRP1O14786 923 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 KDM4BO94953 1096 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 OR12D2P58182 307 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 GHDCQ8N2G8 530 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 RFT1Q96AA3 541 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 CD93Q9NPY3 652 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 ABI3Q9P2A4 366 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 RNF11Q9Y3C5 154 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 PCP4L1A6NKN8 68 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 SAP18O00422 153 aaKnown RBP20.4■□□□□ 0.86
SH3D19-211ENST00000604030 FLRT2O43155 660 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 CD1DP15813 335 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 ZNF182P17025 639 aaPredicted RBP20.4■□□□□ 0.86
SH3D19-211ENST00000604030 PDX1P52945 283 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 VAMP2P63027 116 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 DEFA5Q01523 94 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.4■□□□□ 0.861e-6■■■□□ 15.8
SH3D19-211ENST00000604030 PLD6Q8N2A8 252 aaKnown RBP20.4■□□□□ 0.86
SH3D19-211ENST00000604030 OR5AK3PQ8NH89 298 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 TMEM203Q969S6 136 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 SLC2A13Q96QE2 648 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 TBL1XR1Q9BZK7 514 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 NSUN3Q9H649 340 aaKnown RBP20.4■□□□□ 0.86
SH3D19-211ENST00000604030 CTPS2Q9NRF8 586 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 OXSR1O95747 527 aaPredicted RBP20.4■□□□□ 0.86
SH3D19-211ENST00000604030 ACTC1P68032 377 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 ACTA1P68133 377 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 SP2Q02086 613 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 VMACQ2NL98 169 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 LCN8Q6JVE9 175 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 ASRGL1Q7L266 308 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 CCDC54Q8NEL0 328 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 DOHHQ9BU89 302 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 CCDC32Q9BV29 185 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 PCDHB11Q9Y5F2 797 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 RFC2P35250 354 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 AP2S1P53680 142 aaPredicted RBP20.4■□□□□ 0.86
SH3D19-211ENST00000604030 SMU1Q2TAY7 513 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 YIPF7Q8N8F6 280 aa20.4■□□□□ 0.86
SH3D19-211ENST00000604030 ASCC1Q8N9N2 400 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms