RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 BCAS4Q8TDM0 211 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 SLC13A3Q8WWT9 602 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 REPS1Q96D71 796 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 MARK4Q96L34 752 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 ZNF717Q9BY31 904 aaPredicted RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 LHX9Q9NQ69 397 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 TRPC5OSA6NMA1 111 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 CLEC3AO75596 197 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 DKK1O94907 266 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 ALDOCP09972 364 aaKnown RBP21.87■■□□□ 1.09
IRF3-227ENST00000600911 CSTF3Q12996 717 aaKnown RBP21.87■■□□□ 1.09
IRF3-227ENST00000600911 KIAA0040Q15053 153 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 NR6A1Q15406 480 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 GALNTL6Q49A17 601 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 RFTN2Q52LD8 501 aaPredicted RBP21.87■■□□□ 1.09
IRF3-227ENST00000600911 PRAMEF17Q5VTA0 474 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 CDCP2Q5VXM1 449 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 CARFQ8N187 725 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 ARHGEF39Q8N4T4 335 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 TUBGCP3Q96CW5 907 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 SLC6A16Q9GZN6 736 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 SPRTNQ9H040 489 aaPredicted RBP21.87■■□□□ 1.09
IRF3-227ENST00000600911 OCIAD1Q9NX40 245 aa21.87■■□□□ 1.09
IRF3-227ENST00000600911 FER1L5A0AVI2 2057 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 PMS2P1A4D2B8 440 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 LRIT2A6NDA9 550 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 SLC28A1O00337 649 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 KLHL18O94889 574 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 TOR1AIP1Q5JTV8 583 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 CHCHD4Q8N4Q1 142 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 WDR48Q8TAF3 677 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 ZNF285Q96NJ3 590 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 CHRNA10Q9GZZ6 450 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 BRF2Q9HAW0 419 aa21.86■■□□□ 1.09
IRF3-227ENST00000600911 SIDT1Q9NXL6 827 aaKnown RBP21.86■■□□□ 1.09
IRF3-227ENST00000600911 G3BP2Q9UN86 482 aaKnown RBP21.86■■□□□ 1.09
IRF3-227ENST00000600911 RUVBL1Q9Y265 456 aaKnown RBP21.86■■□□□ 1.09
IRF3-227ENST00000600911 E9PBE3 544 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 PLPP1O14494 284 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 TOX3O15405 576 aaPredicted RBP21.85■■□□□ 1.09
IRF3-227ENST00000600911 KLHL41O60662 606 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 FTH1P19P0C7X4 201 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 CD1EP15812 388 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 RAE1P78406 368 aaKnown RBP21.85■■□□□ 1.09
IRF3-227ENST00000600911 ILKQ13418 452 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 NAA25Q14CX7 972 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 CLPPQ16740 277 aaPredicted RBP21.85■■□□□ 1.09
IRF3-227ENST00000600911 ADPRMQ3LIE5 342 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 C6orf136Q5SQH8 315 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 WASHC2DQ5SRD0 308 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 DEPDC1Q5TB30 811 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 KHDRBS2Q5VWX1 349 aaKnown RBP21.85■■□□□ 1.09
IRF3-227ENST00000600911 PRSS41Q7RTY9 318 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 KIRREL3Q8IZU9 778 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 OR1L3Q8NH93 324 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 NT5CQ8TCD5 201 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 MS4A6EQ96DS6 147 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 DPYSL5Q9BPU6 564 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 C1orf50Q9BV19 199 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 TCF7L2Q9NQB0 619 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 PCDHGA1Q9Y5H4 931 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 PTPRBP23467 1997 aa21.85■■□□□ 1.09
IRF3-227ENST00000600911 CSRP1P21291 193 aaKnown RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 RPL38P63173 70 aaKnown RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 IMPG1Q17R60 797 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 AP5B1Q2VPB7 878 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 SPDYAQ5MJ70 313 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 NXNQ6DKJ4 435 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 RBM44Q6ZP01 1051 aaKnown RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 KMT5CQ86Y97 462 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 MARCH9Q86YJ5 346 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 CSNK1A1LQ8N752 337 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 GBP7Q8N8V2 638 aaPredicted RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 ZCCHC10Q8TBK6 192 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 ACTRT2Q8TDY3 377 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 ZNF501Q96CX3 271 aaPredicted RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 C11orf24Q96F05 449 aaPredicted RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 CMTM7Q96FZ5 175 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 PRM3Q9NNZ6 103 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 VPS29Q9UBQ0 182 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 PPT2Q9UMR5 302 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 PLCL2Q9UPR0 1127 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 DLGAP4Q9Y2H0 992 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 DCHS1Q96JQ0 3298 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 A0A1W2PNU3 283 aaPredicted RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 TMEM150CB9EJG8 249 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 NDUFAB1O14561 156 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 RGS14O43566 566 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 RSL1D1O76021 490 aaKnown RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 GBAP04062 536 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 SERPINA6P08185 405 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 HSD3B1P14060 373 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 PRPH2P23942 346 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 HSD3B2P26439 372 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 PRTGQ2VWP7 1150 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 ZC3H12BQ5HYM0 836 aaKnown RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 ZNF793Q6ZN11 406 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 C1orf52Q8N6N3 182 aaKnown RBP21.84■■□□□ 1.09
IRF3-227ENST00000600911 TRPV3Q8NET8 790 aa21.84■■□□□ 1.09
IRF3-227ENST00000600911 TTLQ8NG68 377 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms