RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 SNX4O95219 450 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 SOX14O95416 240 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 VNN2O95498 520 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 CLCN4P51793 760 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 RHOAP61586 193 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 TAS1R1Q7RTX1 841 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 ZNF438Q7Z4V0 828 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 NAGSQ8N159 534 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 C8orf48Q96LL4 319 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 SIGLEC11Q96RL6 698 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 TCF25Q9BQ70 676 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 SMURF1Q9HCE7 757 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 STARD7Q9NQZ5 370 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 CLEC2DQ9UHP7 191 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 MKLN1Q9UL63 735 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 SMLR1H3BR10 107 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 LRRTM2O43300 516 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 MTX2O75431 263 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
UPF1-210ENST00000600689 EPORP19235 508 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 RFX2P48378 723 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 ITGA1P56199 1179 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 CSTF3Q12996 717 aaKnown RBP17.68■□□□□ 0.42
UPF1-210ENST00000600689 UGT8Q16880 541 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 DUOXA1Q1HG43 343 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 ERAP2Q6P179 960 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 SYCE2Q6PIF2 218 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 CBLL1Q75N03 491 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 CARNMT1Q8N4J0 409 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 FUBP3Q96I24 572 aaKnown RBP eCLIP17.68■□□□□ 0.42
UPF1-210ENST00000600689 ANKHQ9HCJ1 492 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 TMEM45AQ9NWC5 275 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 HECAQ9UBI9 543 aaPredicted RBP17.68■□□□□ 0.42
UPF1-210ENST00000600689 ACSL6Q9UKU0 697 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 TSC22D2O75157 780 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 APOL3O95236 402 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 ANXA5P08758 320 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 WEE1P30291 646 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 HOXC5Q00444 222 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 GALK2Q01415 458 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 GPNMBQ14956 572 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 CHRNA6Q15825 494 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 LEXMQ3ZCV2 418 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 RTP2Q5QGT7 225 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 FAHD1Q6P587 224 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 FAM131AQ6UXB0 335 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 TMPRSS11AQ6ZMR5 421 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 SLC34A3Q8N130 599 aa17.68■□□□□ 0.42
UPF1-210ENST00000600689 GOLGA4Q13439 2230 aaKnown RBP17.67■□□□□ 0.42
UPF1-210ENST00000600689 OR6C70A6NIJ9 312 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 PCDH17O14917 1159 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 SLITRK5O94991 958 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 IGFBP1P08833 259 aaPredicted RBP17.67■□□□□ 0.42
UPF1-210ENST00000600689 CRYBA2P53672 197 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 KRR1Q13601 381 aaKnown RBP17.67■□□□□ 0.42
UPF1-210ENST00000600689 TCTN1Q2MV58 587 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 ZXDCQ2QGD7 858 aaPredicted RBP17.67■□□□□ 0.42
UPF1-210ENST00000600689 HKDC1Q2TB90 917 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 ABI3BPQ7Z7G0 1075 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 OR4K1Q8NGD4 311 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 OR52E4Q8NGH9 312 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 OR5AK3PQ8NH89 298 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 SRRDQ9UH36 339 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 PCDHGB3Q9Y5G1 929 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 TMEM189-UBE2V1I3L0A0 370 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 HTR2BP41595 481 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 RAB25P57735 213 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 KCNJ10P78508 379 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 ZNF852Q6ZMS4 543 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 CCDC190Q86UF4 302 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 LSRQ86X29 649 aaPredicted RBP17.67■□□□□ 0.42
UPF1-210ENST00000600689 BBS7Q8IWZ6 715 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 STK40Q8N2I9 435 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 CHAC2Q8WUX2 184 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 USP7Q93009 1102 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 MAGEH1Q9H213 219 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 DNAJC27Q9NZQ0 273 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 CFAP20Q9Y6A4 193 aaKnown RBP17.67■□□□□ 0.42
UPF1-210ENST00000600689 NINQ8N4C6 2090 aa17.67■□□□□ 0.42
UPF1-210ENST00000600689 EIF3FO00303 357 aaPredicted RBP17.66■□□□□ 0.42
UPF1-210ENST00000600689 ACSL4O60488 711 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 HLA-EP13747 358 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 ETFAP13804 333 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 CR2P20023 1033 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 HNF4AP41235 474 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 GPLD1P80108 840 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.66■□□□□ 0.42
UPF1-210ENST00000600689 CEP78Q5JTW2 689 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 PRSS55Q6UWB4 352 aaPredicted RBP17.66■□□□□ 0.42
UPF1-210ENST00000600689 RFLNAQ6ZTI6 216 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 PTCHD4Q6ZW05 846 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 UBE2R2Q712K3 238 aaPredicted RBP17.66■□□□□ 0.42
UPF1-210ENST00000600689 GPR65Q8IYL9 337 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 C7orf34Q96L11 122 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 VPS35Q96QK1 796 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 PITX2Q99697 317 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 BARHL1Q9BZE3 327 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 MARCH5Q9NX47 278 aa17.66■□□□□ 0.42
UPF1-210ENST00000600689 MBD1Q9UIS9 605 aaPredicted RBP17.66■□□□□ 0.42
UPF1-210ENST00000600689 RIMKLBQ9ULI2 386 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms