RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PSMB5P28074 263 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 GRIA3P42263 894 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 RAE1P78406 368 aaKnown RBP19.2■□□□□ 0.66
PNKP-214ENST00000600573 SIGLEC14Q08ET2 396 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 PLCL1Q15111 1095 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 AASDHQ4L235 1098 aaPredicted RBP19.2■□□□□ 0.66
PNKP-214ENST00000600573 TMEM35AQ53FP2 167 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 KHDRBS2Q5VWX1 349 aaKnown RBP19.2■□□□□ 0.66
PNKP-214ENST00000600573 IKBIPQ70UQ0 350 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 R3HCC1LQ7Z5L2 792 aaKnown RBP19.2■□□□□ 0.66
PNKP-214ENST00000600573 CAMKMTQ7Z624 323 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 ADGRF3Q8IZF5 1079 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 ZNF740Q8NDX6 193 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 TRPV3Q8NET8 790 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 VPS37AQ8NEZ2 397 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 OR8J2Q8NGG1 315 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 NUDT8Q8WV74 236 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 HSPA12BQ96MM6 686 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 MS4A8Q9BY19 250 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 TRIM8Q9BZR9 551 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 KCNH6Q9H252 994 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 DLGAP2Q9P1A6 1054 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 ADAM29Q9UKF5 820 aa19.2■□□□□ 0.66
PNKP-214ENST00000600573 VILLO15195 856 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 OR1F1O43749 312 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 RPSAP08865 295 aaKnown RBP19.19■□□□□ 0.66
PNKP-214ENST00000600573 HPCAL1P37235 193 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 KIR3DL1P43629 444 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 YBX1P67809 324 aaKnown RBP19.19■□□□□ 0.66
PNKP-214ENST00000600573 RELAQ04206 551 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 ZNF763Q0D2J5 394 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 FXNQ16595 210 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 PRRT3Q5FWE3 981 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 LPCAT4Q643R3 524 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 COMMD6Q7Z4G1 85 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 VN1R5Q7Z5H4 357 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 ADCK2Q7Z695 626 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 C1orf216Q8TAB5 229 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 NELL1Q92832 810 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 MTERF3Q96E29 417 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 OR51B5Q9H339 312 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 TCEAL2Q9H3H9 227 aaPredicted RBP19.19■□□□□ 0.66
PNKP-214ENST00000600573 COPS7BQ9H9Q2 264 aaPredicted RBP19.19■□□□□ 0.66
PNKP-214ENST00000600573 FAM120CQ9NX05 1096 aaKnown RBP19.19■□□□□ 0.66
PNKP-214ENST00000600573 EGFL7Q9UHF1 273 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 NEUROG3Q9Y4Z2 214 aa19.19■□□□□ 0.66
PNKP-214ENST00000600573 GNG14A0A1W2PPG7 69 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 DFNA5O60443 496 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 WNT1P04628 370 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 TRPC1P48995 793 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 NXPH1P58417 271 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 HNRNPKP61978 463 aaKnown RBP eCLIP19.18■□□□□ 0.66
PNKP-214ENST00000600573 ANXA8L1Q5VT79 327 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 ADNP2Q6IQ32 1131 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 ZNF425Q6IV72 752 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 ARMCX6Q7L4S7 300 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 PROSER1Q86XN7 944 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 NATD1Q8N6N6 113 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 ANKRD53Q8N9V6 530 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 ZDHHC1Q8WTX9 485 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 RGMAQ96B86 450 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 UCK1Q9HA47 277 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 MAGEL2Q9UJ55 1249 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 INVSQ9Y283 1065 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 DTNAQ9Y4J8 743 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 PCDHB3Q9Y5E6 796 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 IGKV1-8A0A0C4DH67 115 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 PRAMEF33A0A0G2JMD5 474 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 TNFSF14O43557 240 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 PEBP1P30086 187 aaKnown RBP19.18■□□□□ 0.66
PNKP-214ENST00000600573 MTPNP58546 118 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 CYP4F3Q08477 520 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 SIM2Q14190 667 aaPredicted RBP19.18■□□□□ 0.66
PNKP-214ENST00000600573 GPR18Q14330 331 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 PGS1Q32NB8 556 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 GRAMD1BQ3KR37 738 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 ZNF542PQ5EBM4 170 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 LRIF1Q5T3J3 769 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 IFNEQ86WN2 208 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 PDSS2Q86YH6 399 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 DEFB119Q8N690 84 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 SRFBP1Q8NEF9 429 aaKnown RBP19.18■□□□□ 0.66
PNKP-214ENST00000600573 FAM46DQ8NEK8 389 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 GPR156Q8NFN8 814 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 THAP11Q96EK4 314 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 NRTNQ99748 197 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 PKP2Q99959 881 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 DPH7Q9BTV6 452 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 LRRC61Q9BV99 259 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 MIR1-1HGQ9H1L0 117 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 MYNNQ9NPC7 610 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 ATAD3AQ9NVI7 634 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 SPHK1Q9NYA1 384 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 VAPAQ9P0L0 249 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 ATP6V1HQ9UI12 483 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 KLK4Q9Y5K2 254 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 AP1M2Q9Y6Q5 423 aa19.18■□□□□ 0.66
PNKP-214ENST00000600573 TRBV23OR9-2A0A075B6M9 112 aa19.17■□□□□ 0.66
PNKP-214ENST00000600573 TRBV5-3A0A0A0MS03 114 aa19.17■□□□□ 0.66
PNKP-214ENST00000600573 DHRS12A0PJE2 317 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms