RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HHATQ5VTY9 493 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 LETMD1Q6P1Q0 360 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 CYB5D1Q6P9G0 228 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 ZCCHC23Q6ZST2 131 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 SYVN1Q86TM6 617 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 PPP1R3BQ86XI6 285 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 NUDCD3Q8IVD9 361 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 KRT78Q8N1N4 520 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 OR4F6Q8NGB9 312 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 MGARPQ8TDB4 240 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 ATP6V1E2Q96A05 226 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 TM4SF19Q96DZ7 209 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 B3GNT4Q9C0J1 378 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 B3GALT1Q9Y5Z6 326 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 AP1M2Q9Y6Q5 423 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 RELNP78509 3460 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 FITM1A5D6W6 292 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 H3BQF6 201 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 NPHS1O60500 1241 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 MLYCDO95822 493 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 OTCP00480 354 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 ARRB2P32121 409 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 AHRP35869 848 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 PPP2R2AP63151 447 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 RBBP5Q15291 538 aaKnown RBP17.97■□□□□ 0.47
CCDC9-205ENST00000600117 PRTGQ2VWP7 1150 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 PAGE2BQ5JRK9 111 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 WASHC2DQ5SRD0 308 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 DCAF12Q5T6F0 453 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 PRAMEF17Q5VTA0 474 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 FAM219BQ5XKK7 198 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 ADNP2Q6IQ32 1131 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 PWWP2BQ6NUJ5 590 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 TMIGD1Q6UXZ0 262 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 CEACAM20Q6UY09 585 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 VN1R5Q7Z5H4 357 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 MILR1Q7Z6M3 343 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCDC9-205ENST00000600117 LAS2Q8IYD9 372 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 EXD3Q8N9H8 876 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 AGAP11Q8TF27 550 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 N4BP2L2Q92802 583 aaPredicted RBP17.97■□□□□ 0.47
CCDC9-205ENST00000600117 MED4Q9NPJ6 270 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 ZFP69BQ9UJL9 534 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 SERTAD3Q9UJW9 196 aa17.97■□□□□ 0.47
CCDC9-205ENST00000600117 CDRT15L2A8MXV6 281 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 OR2B3O76000 313 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 OR4F21O95013 312 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 STATHP02808 62 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 PKNOX1P55347 436 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 CHI3L2Q15782 390 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 TCTE1Q5JU00 501 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 MED27Q6P2C8 311 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 ATG14Q6ZNE5 492 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 GPRIN3Q6ZVF9 776 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 MYLK4Q86YV6 388 aaPredicted RBP17.96■□□□□ 0.47
CCDC9-205ENST00000600117 ARHGEF39Q8N4T4 335 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 TBC1D19Q8N5T2 526 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 CSNK1A1LQ8N752 337 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 OR7G3Q8NG95 312 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 CREB3L4Q8TEY5 395 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 CNDP1Q96KN2 507 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 TEFMQ96QE5 360 aaKnown RBP17.96■□□□□ 0.47
CCDC9-205ENST00000600117 PAIP2Q9BPZ3 127 aaKnown RBP17.96■□□□□ 0.47
CCDC9-205ENST00000600117 ZPBPQ9BS86 351 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 TRMOQ9BU70 441 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 ASPSCR1Q9BZE9 553 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 SPRY4Q9C004 299 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 RHBGQ9H310 441 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 TNFRSF12AQ9NP84 129 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 STARD5Q9NSY2 213 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 FOXJ2Q9P0K8 574 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 TRPS1Q9UHF7 1281 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 STK38LQ9Y2H1 464 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 PCDHGA7Q9Y5G6 932 aa17.96■□□□□ 0.47
CCDC9-205ENST00000600117 H0YIV9 168 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 NVLO15381 856 aaKnown RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 ZSCAN9O15535 394 aaPredicted RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 TBX6O95947 436 aaPredicted RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 SERPINE1P05121 402 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 EIF2S1P05198 315 aaKnown RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 ZNF28P17035 718 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 CYP4F2P78329 520 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 CLN3Q13286 438 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 RCN2Q14257 317 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 ZRSR2Q15696 482 aaKnown RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 CPSF6Q16630 551 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 HIST2H2ACQ16777 129 aaPredicted RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 HKDC1Q2TB90 917 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 HIST2H2AA3Q6FI13 130 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 ASPGQ86U10 573 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 ZNF655Q8N720 491 aaPredicted RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 WDR20Q8TBZ3 569 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 NT5CQ8TCD5 201 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 SREK1Q8WXA9 508 aaKnown RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 UBE2E3Q969T4 207 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 RERGQ96A58 199 aaPredicted RBP17.95■□□□□ 0.46
CCDC9-205ENST00000600117 RNF31Q96EP0 1072 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 MACROD1Q9BQ69 325 aa17.95■□□□□ 0.46
CCDC9-205ENST00000600117 DRC3Q9H069 523 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms