RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 HIST1H2AJQ99878 128 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 H2AFJQ9BTM1 129 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 VN1R1Q9GZP7 353 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.72■□□□□ 0.43
PNKP-213ENST00000599543 ATG10Q9H0Y0 220 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 NINJ2Q9NZG7 142 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 C19orf25Q9UFG5 118 aaPredicted RBP17.72■□□□□ 0.43
PNKP-213ENST00000599543 CROCCQ5TZA2 2017 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 FEZF1A0PJY2 475 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 SLC16A5O15375 505 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 LRRTM2O43300 516 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 JRKO75564 520 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 FAM155BO75949 473 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 F10P00742 488 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 CYC1P08574 325 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 ITGAMP11215 1152 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 IL1RNP18510 177 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 COL8A1P27658 744 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 XCR1P46094 333 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 CSNK1G2P78368 415 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 NAE1Q13564 534 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 HECTD2Q5U5R9 776 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 TMEM214Q6NUQ4 689 aaKnown RBP17.71■□□□□ 0.43
PNKP-213ENST00000599543 PAQR3Q6TCH7 311 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 KIAA0408Q6ZU52 694 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 PRSS41Q7RTY9 318 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 CTAGE3PQ8IX95 158 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 CAMKVQ8NCB2 501 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 OR51Q1Q8NH59 317 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 UHMK1Q8TAS1 419 aaKnown RBP17.71■□□□□ 0.43
PNKP-213ENST00000599543 ZCCHC10Q8TBK6 192 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 FMO2Q99518 471 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 MACROD1Q9BQ69 325 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 FAM129AQ9BZQ8 928 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 ANKHQ9HCJ1 492 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 HCN3Q9P1Z3 774 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 MTRF1LQ9UGC7 380 aaKnown RBP17.71■□□□□ 0.43
PNKP-213ENST00000599543 TEKT2Q9UIF3 430 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 SH2B3Q9UQQ2 575 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 CREBBPQ92793 2442 aa17.71■□□□□ 0.43
PNKP-213ENST00000599543 C1QAP02745 245 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 SLC35G6P0C7Q6 338 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 CDH1P12830 882 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 BCL6P41182 706 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 EFNA3P52797 238 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 SNRPNP63162 240 aaKnown RBP17.7■□□□□ 0.42
PNKP-213ENST00000599543 PDAP1Q13442 181 aaKnown RBP17.7■□□□□ 0.42
PNKP-213ENST00000599543 ZNF460Q14592 562 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 PHKG1Q16816 387 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 KBTBD12Q3ZCT8 623 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 ABHD17BQ5VST6 288 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 ZNF787Q6DD87 383 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 CAPN13Q6MZZ7 669 aaPredicted RBP17.7■□□□□ 0.42
PNKP-213ENST00000599543 ASPGQ86U10 573 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 PPM1NQ8N819 430 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 SUN3Q8TAQ9 357 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 IMMP1LQ96LU5 166 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 HAUS8Q9BT25 410 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 RNF32Q9H0A6 362 aa17.7■□□□□ 0.42
PNKP-213ENST00000599543 FAM159BA6NKW6 160 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 SGK494L7N484 410 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 SEC24DO94855 1032 aaPredicted RBP17.69■□□□□ 0.42
PNKP-213ENST00000599543 WDPCPO95876 746 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 FAM153BP0C7A2 387 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 DCTP40126 519 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 IL2P60568 153 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 ZNF33BQ06732 778 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 FAM153CQ494X1 144 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 LCTLQ6UWM7 567 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 LANCL3Q6ZV70 420 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 CPEB2Q7Z5Q1 589 aaKnown RBP17.69■□□□□ 0.42
PNKP-213ENST00000599543 ZC3HC1Q86WB0 502 aaKnown RBP17.69■□□□□ 0.42
PNKP-213ENST00000599543 IFT20Q8IY31 132 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 SLC13A3Q8WWT9 602 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 CYTH2Q99418 400 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 SGPP1Q9BX95 441 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 PHACTR1Q9C0D0 580 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 CDC42EP4Q9H3Q1 356 aaKnown RBP17.69■□□□□ 0.42
PNKP-213ENST00000599543 ARL15Q9NXU5 204 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 MTO1Q9Y2Z2 717 aaKnown RBP17.69■□□□□ 0.42
PNKP-213ENST00000599543 MYO7BQ6PIF6 2116 aa17.69■□□□□ 0.42
PNKP-213ENST00000599543 IGHV3-20A0A0C4DH32 117 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 FAM95CA0A1B0GW59 222 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 ACSL3O95573 720 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 MYBL2P10244 700 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 AGTR2P50052 363 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 CCR8P51685 355 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 AP1S2P56377 157 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 BTBD16Q32M84 506 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 GALNT7Q86SF2 657 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 SLC26A11Q86WA9 606 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 KCT2Q8NC54 265 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 NR4A3Q92570 626 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 TM4SF19Q96DZ7 209 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 TAAR6Q96RI8 345 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 TRIM54Q9BYV2 358 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 CAB39LQ9H9S4 337 aa17.68■□□□□ 0.42
PNKP-213ENST00000599543 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.68■□□□□ 0.42
PNKP-213ENST00000599543 V9GYY5 206 aaPredicted RBP17.68■□□□□ 0.42
PNKP-213ENST00000599543 A0A1B0GUH1 482 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 261.4 ms