RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CXCR2P25025 360 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 SSTR1P30872 391 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 FAM53BQ14153 422 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 NR6A1Q15406 480 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 PPP1R3AQ16821 1122 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 C18orf21Q32NC0 220 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-203ENST00000598359 TMEM214Q6NUQ4 689 aaKnown RBP13.02□□□□□ -0.33
SCAF1-203ENST00000598359 ZDHHC24Q6UX98 284 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 LANCL3Q6ZV70 420 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 NDUFAF7Q7L592 441 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 ASPGQ86U10 573 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 KBTBD2Q8IY47 623 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 SPATA6LQ8N4H0 392 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 SIRT6Q8N6T7 355 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 MFSD9Q8NBP5 474 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 CATSPER1Q8NEC5 780 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 SLC13A3Q8WWT9 602 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 NEIL2Q969S2 332 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 WDR77Q9BQA1 342 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-203ENST00000598359 RBCK1Q9BYM8 510 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 TRIM54Q9BYV2 358 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 TGIF2Q9GZN2 237 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 VN1R1Q9GZP7 353 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 CAB39LQ9H9S4 337 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 PTGFRNQ9P2B2 879 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 NOVA2Q9UNW9 492 aaKnown RBP13.02□□□□□ -0.33
SCAF1-203ENST00000598359 MTO1Q9Y2Z2 717 aaKnown RBP13.02□□□□□ -0.33
SCAF1-203ENST00000598359 PCDHGA10Q9Y5H3 936 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 ABCA12Q86UK0 2595 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 IGHV1-45A0A0A0MS14 117 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 BLACEA4D250 179 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 KLHL41O60662 606 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 DNAJB6O75190 326 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 SEMA7AO75326 666 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 NSA2O95478 260 aaKnown RBP13.01□□□□□ -0.33
SCAF1-203ENST00000598359 F10P00742 488 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 PRR35P0CG20 571 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 RNF224P0DH78 156 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 GMPRP36959 345 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 XCR1P46094 333 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 CCR8P51685 355 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 AP1S2P56377 157 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 PCOLCEQ15113 449 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 TSNQ15631 228 aaKnown RBP13.01□□□□□ -0.33
SCAF1-203ENST00000598359 MINDY4Q4G0A6 757 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 CRB2Q5IJ48 1285 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 IGFL2Q6UWQ7 119 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 CAMKVQ8NCB2 501 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 ABHD11Q8NFV4 315 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 OR5T3Q8NGG3 340 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 OR51Q1Q8NH59 317 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 DNAJB14Q8TBM8 379 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 BRIX1Q8TDN6 353 aaKnown RBP13.01□□□□□ -0.33
SCAF1-203ENST00000598359 PYROXD1Q8WU10 500 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 PSMF1Q92530 271 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 THAP11Q96EK4 314 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 PDLIM5Q96HC4 596 aaKnown RBP13.01□□□□□ -0.33
SCAF1-203ENST00000598359 VPS39Q96JC1 886 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 VPS50Q96JG6 964 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 HAUS8Q9BT25 410 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 MCMBPQ9BTE3 642 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 ANKHQ9HCJ1 492 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 LRRC4CQ9HCJ2 640 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 PLA2G3Q9NZ20 509 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 WHRNQ9P202 907 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 NAALAD2Q9Y3Q0 740 aa13.01□□□□□ -0.33
SCAF1-203ENST00000598359 COPG1Q9Y678 874 aaKnown RBP13.01□□□□□ -0.33
SCAF1-203ENST00000598359 RP1L1Q8IWN7 2480 aaPredicted RBP13.01□□□□□ -0.33
SCAF1-203ENST00000598359 H0YIG0 161 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 NDUFS4O43181 175 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 CDC123O75794 336 aaPredicted RBP13□□□□□ -0.33
SCAF1-203ENST00000598359 SEC24DO94855 1032 aaPredicted RBP13□□□□□ -0.33
SCAF1-203ENST00000598359 AGFG2O95081 481 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 ENO2P09104 434 aaPredicted RBP13□□□□□ -0.33
SCAF1-203ENST00000598359 ITGAMP11215 1152 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 GRK3P35626 688 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 OLR1P78380 273 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 CALCOCO2Q13137 446 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 TERF2Q15554 542 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 B3GNTL1Q67FW5 361 aaPredicted RBP13□□□□□ -0.33
SCAF1-203ENST00000598359 HIST2H2BCQ6DN03 193 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 TMEM205Q6UW68 189 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 ISLR2Q6UXK2 745 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 THOC6Q86W42 341 aaKnown RBP13□□□□□ -0.33
SCAF1-203ENST00000598359 NKAPQ8N5F7 415 aaKnown RBP13□□□□□ -0.33
SCAF1-203ENST00000598359 OR4K1Q8NGD4 311 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 PRR7Q8TB68 274 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 PPP4R1Q8TF05 950 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 SLC5A11Q8WWX8 675 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 ATL1Q8WXF7 558 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 ZIM3Q96PE6 472 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 FMO2Q99518 471 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 EGFL8Q99944 293 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 ZNF700Q9H0M5 742 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 RHOJQ9H4E5 214 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 EPS8L2Q9H6S3 715 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 SLC22A14Q9Y267 594 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 SCN3AQ9NY46 2000 aa13□□□□□ -0.33
SCAF1-203ENST00000598359 LOC102723996A0A087X1L8 192 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms