RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 BAG5Q9UL15 447 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 CDH7Q9ULB5 785 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 KLHL18O94889 574 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 C6orf47O95873 294 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 DNAJA1P31689 397 aaKnown RBP21.8■■□□□ 1.08
SRRM1-222ENST00000596378 PNLIPRP1P54315 467 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 DCTN2Q13561 401 aaKnown RBP21.8■■□□□ 1.08
SRRM1-222ENST00000596378 PRSS53Q2L4Q9 553 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 GALNT18Q6P9A2 607 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 C11orf96Q7Z7L8 435 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 EFCAB11Q9BUY7 163 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 REEP4Q9H6H4 257 aa21.8■■□□□ 1.08
SRRM1-222ENST00000596378 FAF1Q9UNN5 650 aaPredicted RBP21.8■■□□□ 1.08
SRRM1-222ENST00000596378 CFAP20Q9Y6A4 193 aaKnown RBP21.8■■□□□ 1.08
SRRM1-222ENST00000596378 C2orf16Q68DN1 1984 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 GRXCR1A8MXD5 290 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 GCM2O75603 506 aaPredicted RBP21.79■■□□□ 1.08
SRRM1-222ENST00000596378 OPN1SWP03999 348 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ITGAMP11215 1152 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ETFAP13804 333 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 HOXB6P17509 224 aaKnown RBP21.79■■□□□ 1.08
SRRM1-222ENST00000596378 GSTM2P28161 218 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ACADLP28330 430 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 CRATP43155 626 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ENTPD1P49961 510 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 CDK5R2Q13319 367 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 VEZF1Q14119 521 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 MPEG1Q2M385 716 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 RFX4Q33E94 735 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 KDM4DQ6B0I6 523 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 FAM180BQ6P0A1 224 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 NXPE4Q6UWF7 544 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ARHGAP22Q7Z5H3 698 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 LAS2Q8IYD9 372 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 MMP21Q8N119 569 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.79■■□□□ 1.08
SRRM1-222ENST00000596378 WDR34Q96EX3 536 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 CCDC177Q9NQR7 707 aaPredicted RBP21.79■■□□□ 1.08
SRRM1-222ENST00000596378 SIRT5Q9NXA8 310 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ASF1AQ9Y294 204 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 TMEM229AB2RXF0 380 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 RNASET2O00584 256 aaKnown RBP21.79■■□□□ 1.08
SRRM1-222ENST00000596378 NFATC1O95644 943 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 TNFRSF1BP20333 461 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 FPR1P21462 350 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 FMO3P31513 532 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ARHGDIAP52565 204 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 KCNJ10P78508 379 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 BIRC2Q13490 618 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ZC3H12BQ5HYM0 836 aaKnown RBP21.79■■□□□ 1.08
SRRM1-222ENST00000596378 LAIR1Q6GTX8 287 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 DHRS4L2Q6PKH6 230 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ZNF765Q7L2R6 523 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 OR2L2Q8NH16 312 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 TBC1D20Q96BZ9 403 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 ASPSCR1Q9BZE9 553 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 CCDC90BQ9GZT6 254 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 DYRK4Q9NR20 520 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 TM7SF3Q9NS93 570 aa21.79■■□□□ 1.08
SRRM1-222ENST00000596378 TDRKHQ9Y2W6 561 aaKnown RBP21.79■■□□□ 1.08
SRRM1-222ENST00000596378 KLK1P06870 262 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 MVDP53602 400 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 PLA2G16P53816 162 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 TAS2R50P59544 299 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 DPTQ07507 201 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 IQCCQ4KMZ1 466 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 GTF2IRD2BQ6EKJ0 949 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 ERN2Q76MJ5 926 aaKnown RBP21.78■■□□□ 1.08
SRRM1-222ENST00000596378 GTF2IRD2Q86UP8 949 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 CPA6Q8N4T0 437 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 OR5AK3PQ8NH89 298 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 ASB16Q96NS5 453 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 TMEM245Q9H330 911 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 THUMPD1Q9NXG2 353 aaKnown RBP21.78■■□□□ 1.08
SRRM1-222ENST00000596378 SLC23A2Q9UGH3 650 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 ATP6V1HQ9UI12 483 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 DGKBQ9Y6T7 804 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 PLXND1Q9Y4D7 1925 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 FOXE1O00358 373 aaPredicted RBP21.78■■□□□ 1.08
SRRM1-222ENST00000596378 NR4A1P22736 598 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 FSHRP23945 695 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 P2RY2P41231 377 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 IL12RB1P42701 662 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 GABARAPL2P60520 117 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 C2orf80Q0P641 193 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 GRSF1Q12849 480 aaKnown RBP eCLIP21.78■■□□□ 1.08
SRRM1-222ENST00000596378 PAGE2BQ5JRK9 111 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 C16orf78Q8WTQ4 265 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 C7orf34Q96L11 122 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 OR52A5Q9H2C5 316 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 BLOC1S6Q9UL45 172 aa21.78■■□□□ 1.08
SRRM1-222ENST00000596378 MAN1A2O60476 641 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 FURINP09958 794 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 ZNF182P17025 639 aaPredicted RBP21.77■■□□□ 1.08
SRRM1-222ENST00000596378 RYKP34925 604 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 GALK1P51570 392 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 ITGA1P56199 1179 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 HIST2H2ACQ16777 129 aaPredicted RBP21.77■■□□□ 1.08
SRRM1-222ENST00000596378 HIST2H2AA3Q6FI13 130 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 PSRC1Q6PGN9 363 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms