RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TMEM126BQ8IUX1 230 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 CCNYL1Q8N7R7 359 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 HUS1BQ8NHY5 278 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 MS4A6EQ96DS6 147 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 SORT1Q99523 831 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 ULBP3Q9BZM4 244 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 DRC3Q9H069 523 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 TUBB1Q9H4B7 451 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 ACTR5Q9H9F9 607 aaPredicted RBP10.05□□□□□ -0.8
LIG1-210ENST00000596332 KCNK9Q9NPC2 374 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 PRDM7Q9NQW5 492 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 THSD1Q9NS62 852 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 PSD3Q9NYI0 1048 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 CCL27Q9Y4X3 112 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 SLC22A7Q9Y694 548 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 AHCTF1Q8WYP5 2266 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 CFAP47Q6ZTR5 3102 aa10.05□□□□□ -0.8
LIG1-210ENST00000596332 SERTM1A2A2V5 107 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 WDR91A4D1P6 747 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 MAGEB17A8MXT2 336 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 FFAR3O14843 346 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 DSCR3O14972 297 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 GPR42O15529 346 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 ATP8B1O43520 1251 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 NPHS1O60500 1241 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 RAD1O60671 282 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 H2AFYO75367 372 aaKnown RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 LYPLA1O75608 230 aaPredicted RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 KLF7O75840 302 aaPredicted RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 OTCP00480 354 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 FGF4P08620 206 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CHN1P15882 459 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CXCR2P25025 360 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CD82P27701 267 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 SERPINB3P29508 390 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 STAT5AP42229 794 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 PIK3CBP42338 1070 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 OR1D4P47884 311 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CCNG1P51959 295 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CYP4F2P78329 520 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 GALNT1Q10472 559 aaPredicted RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 LAPTM5Q13571 262 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 FAM53BQ14153 422 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 GRM7Q14831 915 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 ARL13AQ5H913 290 aaPredicted RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 DEPDC1Q5TB30 811 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 C1orf189Q5VU69 101 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 FAM69BQ5VUD6 431 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 YOD1Q5VVQ6 348 aaPredicted RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 GARNL3Q5VVW2 1013 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 MRPL14Q6P1L8 145 aaKnown RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 MED27Q6P2C8 311 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 ABHD17CQ6PCB6 329 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 FAM198BQ6UWH4 519 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 C6orf15Q6UXA7 325 aaPredicted RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 ZNF793Q6ZN11 406 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 TTLL10Q6ZVT0 673 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 PROSER1Q86XN7 944 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CCDC63Q8NA47 563 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CAMKVQ8NCB2 501 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 TRPV3Q8NET8 790 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 MTFMTQ96DP5 389 aaKnown RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 C11orf24Q96F05 449 aaPredicted RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CNDP1Q96KN2 507 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 F2RL3Q96RI0 385 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 SHCBP1LQ9BZQ2 653 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CHST8Q9H2A9 424 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 CCDC86Q9H6F5 360 aaKnown RBP10.04□□□□□ -0.8
LIG1-210ENST00000596332 ACTR8Q9H981 624 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 IL17BQ9UHF5 180 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 TRPS1Q9UHF7 1281 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 ZDHHC2Q9UIJ5 367 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 HAO1Q9UJM8 370 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 TIMM22Q9Y584 194 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 ANGPTL3Q9Y5C1 460 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 PCSK5Q92824 1860 aa10.04□□□□□ -0.8
LIG1-210ENST00000596332 IGLV3-12A0A075B6K2 115 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 A0A0A6YYC8 382 aaPredicted RBP10.03□□□□□ -0.8
LIG1-210ENST00000596332 A0A1B0GX78 115 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 VSTM2BA6NLU5 285 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 HMGB1P1B2RPK0 211 aaPredicted RBP10.03□□□□□ -0.8
LIG1-210ENST00000596332 TMEM233B4DJY2 109 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 STMND1H3BQB6 276 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 I3L1I5 382 aaPredicted RBP10.03□□□□□ -0.8
LIG1-210ENST00000596332 FOXE1O00358 373 aaPredicted RBP10.03□□□□□ -0.8
LIG1-210ENST00000596332 MANBAO00462 879 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 NDUFS4O43181 175 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 GALR3O60755 368 aaPredicted RBP10.03□□□□□ -0.8
LIG1-210ENST00000596332 CPNE3O75131 537 aaKnown RBP10.03□□□□□ -0.8
LIG1-210ENST00000596332 SNNO75324 88 aaPredicted RBP10.03□□□□□ -0.8
LIG1-210ENST00000596332 MLYCDO95822 493 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 TGFB1P01137 390 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 PDYNP01213 254 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 LIPCP11150 499 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 BGNP21810 368 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 GRK3P35626 688 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
LIG1-210ENST00000596332 ARSFP54793 590 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms