RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CLK4Q9HAZ1 481 aaKnown RBP12.35□□□□□ -0.43
USE1-207ENST00000596136 ANKHQ9HCJ1 492 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 NINJ2Q9NZG7 142 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
USE1-207ENST00000596136 SCN2AQ99250 2005 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 IGHV1-45A0A0A0MS14 117 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 SGK494L7N484 410 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 NDUFS4O43181 175 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 GALR3O60755 368 aaPredicted RBP12.34□□□□□ -0.43
USE1-207ENST00000596136 ALOX12BO75342 701 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 KLHL18O94889 574 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 WDR47O94967 919 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 HEXBP07686 556 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 SERPINA6P08185 405 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 C1GALT1C1LP0DN25 315 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 ALOX12P18054 663 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 CXCR2P25025 360 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 ITGA3P26006 1051 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 PHBP35232 272 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 MLLT10P55197 1068 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 RGS1Q08116 209 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 PCDH1Q08174 1060 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 CDC16Q13042 620 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 E2F2Q14209 437 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 EFTUD2Q15029 972 aaKnown RBP eCLIP12.34□□□□□ -0.43
USE1-207ENST00000596136 COLEC12Q5KU26 742 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 SLC6A19Q695T7 634 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 NIPAL1Q6NVV3 410 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 CMC1Q7Z7K0 106 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 TMPRSS11BQ86T26 416 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 SHISA5Q8N114 240 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 STAG3L4Q8TBR4 150 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 C8orf44Q96CB5 159 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 WDR34Q96EX3 536 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 SEC16BQ96JE7 1060 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 ATOH8Q96SQ7 321 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 ZNF700Q9H0M5 742 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 EHD1Q9H4M9 534 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 CNOT10Q9H9A5 744 aaKnown RBP12.34□□□□□ -0.43
USE1-207ENST00000596136 NMRAL1Q9HBL8 299 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 ZBTB20Q9HC78 741 aaPredicted RBP12.34□□□□□ -0.43
USE1-207ENST00000596136 IGSF5Q9NSI5 407 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 MKL2Q9ULH7 1088 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 NAALAD2Q9Y3Q0 740 aa12.34□□□□□ -0.43
USE1-207ENST00000596136 NSG1A0A0A6YYJ2 146 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 NCF1BA6NI72 391 aaPredicted RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 NCF1CA8MVU1 366 aaPredicted RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 PRAMEF4O60810 478 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 JRKO75564 520 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 STK16O75716 305 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 LTA4HP09960 611 aaKnown RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 NCF1P14598 390 aaPredicted RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 VARSP26640 1264 aaKnown RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 GSTM2P28161 218 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 GMPRP36959 345 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 CASP2P42575 452 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 XCR1P46094 333 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 SLMAPQ14BN4 828 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 PCOLCEQ15113 449 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 IGFBP7Q16270 282 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 PLEKHN1Q494U1 663 aaPredicted RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 CRB2Q5IJ48 1285 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 UBAP2Q5T6F2 1119 aaKnown RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 AGAP7PQ5VUJ5 663 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 PRAMEF9Q5VWM5 478 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 Q6ZS92 163 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 TBC1D1Q86TI0 1168 aaPredicted RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 PARP9Q8IXQ6 854 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 KBTBD2Q8IY47 623 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 CENPLQ8N0S6 344 aaPredicted RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 PLPP5Q8NEB5 264 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 TTLQ8NG68 377 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 RHEBL1Q8TAI7 183 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 ZCCHC10Q8TBK6 192 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 UTP15Q8TED0 518 aaKnown RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 PSMF1Q92530 271 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 TM9SF4Q92544 642 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 IMMP1LQ96LU5 166 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 AGAP4Q96P64 663 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 OR1F2PQ96R84 312 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 LMF1Q96S06 567 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 FMO2Q99518 471 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 CDC42EP4Q9H3Q1 356 aaKnown RBP12.33□□□□□ -0.44
USE1-207ENST00000596136 ZNF160Q9HCG1 818 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 LANCL2Q9NS86 450 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 DNAJC11Q9NVH1 559 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 B3GNT3Q9Y2A9 372 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 ACOT9Q9Y305 439 aa12.33□□□□□ -0.44
USE1-207ENST00000596136 A0A087X1B8 175 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 URADA6NGE7 173 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 TTLL8A6PVC2 850 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 KERAO60938 352 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 H2AFYO75367 372 aaKnown RBP12.32□□□□□ -0.44
USE1-207ENST00000596136 RDH16O75452 317 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 SERPINA7P05543 415 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 C2P06681 752 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 PRR35P0CG20 571 aa12.32□□□□□ -0.44
USE1-207ENST00000596136 C8orf89P0DMQ9 161 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms