RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 FAM98AQ8NCA5 519 aaKnown RBP9.36□□□□□ -0.91
LIG1-209ENST00000596104 CAMKVQ8NCB2 501 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 OR5T3Q8NGG3 340 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 ZCCHC10Q8TBK6 192 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 CD200R1Q8TD46 325 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 CA5BP1Q8WTZ4 195 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 KCNJ9Q92806 393 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 PEX11GQ96HA9 241 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 OR1F2PQ96R84 312 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 RBCK1Q9BYM8 510 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 CDCP1Q9H5V8 836 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 CCDC177Q9NQR7 707 aaPredicted RBP9.36□□□□□ -0.91
LIG1-209ENST00000596104 INTS10Q9NVR2 710 aaKnown RBP9.36□□□□□ -0.91
LIG1-209ENST00000596104 VPS9D1Q9Y2B5 631 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 DHRS7Q9Y394 339 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 NAALAD2Q9Y3Q0 740 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 NEU2Q9Y3R4 380 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 HRH3Q9Y5N1 445 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 SLC22A7Q9Y694 548 aa9.36□□□□□ -0.91
LIG1-209ENST00000596104 FEZF1A0PJY2 475 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 ZBTB14O43829 449 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 DNAJB6O75190 326 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 TPSB2P20231 275 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 TPP2P29144 1249 aaPredicted RBP9.35□□□□□ -0.91
LIG1-209ENST00000596104 TRHRP34981 398 aaPredicted RBP9.35□□□□□ -0.91
LIG1-209ENST00000596104 OR4D2P58180 307 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 MLF1P58340 268 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 MPP1Q00013 466 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 ACTN3Q08043 901 aaPredicted RBP9.35□□□□□ -0.91
LIG1-209ENST00000596104 TPSAB1Q15661 275 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 ARMC3Q5W041 872 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 ZNF470Q6ECI4 717 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 UBE2R2Q712K3 238 aaPredicted RBP9.35□□□□□ -0.91
LIG1-209ENST00000596104 PIWIL4Q7Z3Z4 852 aaKnown RBP9.35□□□□□ -0.91
LIG1-209ENST00000596104 DENND6AQ8IWF6 608 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 CPNE9Q8IYJ1 553 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 EID3Q8N140 333 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 ARMC10Q8N2F6 343 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 MARVELD2Q8N4S9 558 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 SLC13A3Q8WWT9 602 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 GPR21Q99679 349 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 BAG1Q99933 345 aaPredicted RBP9.35□□□□□ -0.91
LIG1-209ENST00000596104 FAM129AQ9BZQ8 928 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 TSGA10Q9BZW7 698 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 NPDC1Q9NQX5 325 aaPredicted RBP9.35□□□□□ -0.91
LIG1-209ENST00000596104 FBXO6Q9NRD1 293 aaPredicted RBP9.35□□□□□ -0.91
LIG1-209ENST00000596104 CACNA1CQ13936 2221 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 MED13LQ71F56 2210 aa9.35□□□□□ -0.91
LIG1-209ENST00000596104 SPG11Q96JI7 2443 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 ZCWPW2A0A1B0GU75 182 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 AVILO75366 819 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 FHP07954 510 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 CD1EP15812 388 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 PAMP19021 973 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 PTGS2P35354 604 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 MAGEA6P43360 314 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 KCNJ1P48048 391 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 CYB561P49447 251 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 HLCSP50747 726 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 ITGA8P53708 1063 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 TFF3Q07654 80 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 CTBP1Q13363 440 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 CMPK2Q5EBM0 449 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 CAPN13Q6MZZ7 669 aaPredicted RBP9.34□□□□□ -0.91
LIG1-209ENST00000596104 MBOAT1Q6ZNC8 495 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 CD163Q86VB7 1156 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 CAND1Q86VP6 1230 aaKnown RBP9.34□□□□□ -0.91
LIG1-209ENST00000596104 C17orf64Q86WR6 236 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 RNF10Q8N5U6 811 aaKnown RBP9.34□□□□□ -0.91
LIG1-209ENST00000596104 POGLUT1Q8NBL1 392 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 MFSD9Q8NBP5 474 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 ZNF740Q8NDX6 193 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 FAM57AQ8TBR7 257 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 TBC1D20Q96BZ9 403 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 SARGQ9BW04 601 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 SGPP1Q9BX95 441 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 PCBD2Q9H0N5 130 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 COQ3Q9NZJ6 369 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 TNFRSF10DQ9UBN6 386 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 PDE10AQ9Y233 779 aa9.34□□□□□ -0.91
LIG1-209ENST00000596104 HEATR5BQ9P2D3 2071 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 IGKV3D-11A0A0A0MRZ8 115 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 A0A1B0GTH9 108 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 FAM237BA0A1B0GVD1 139 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 CTAGE9A4FU28 777 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 SAGE2PA6NJ88 616 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 EIF3FO00303 357 aaPredicted RBP9.33□□□□□ -0.92
LIG1-209ENST00000596104 CHST10O43529 356 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 GALR3O60755 368 aaPredicted RBP9.33□□□□□ -0.92
LIG1-209ENST00000596104 TOXO94900 526 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 B3GALT4O96024 378 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 TPOP07202 933 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 SLC35G6P0C7Q6 338 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 CDH1P12830 882 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 NPPBP16860 134 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 TFEBP19484 476 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 JAK1P23458 1154 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms