RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 FDCSPQ8NFU4 85 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 OR11G2Q8NGC1 345 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 RHEBL1Q8TAI7 183 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 NT5CQ8TCD5 201 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 CREB3L4Q8TEY5 395 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 UBTD2Q8WUN7 234 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 NACC2Q96BF6 587 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 MIEF2Q96C03 454 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 AIF1LQ9BQI0 150 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 CRB3Q9BUF7 120 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC25A23Q9BV35 468 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 TGIF2Q9GZN2 237 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC6A16Q9GZN6 736 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 CNOT10Q9H9A5 744 aaKnown RBP10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 MKKSQ9NPJ1 570 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 SEMA3GQ9NS98 782 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 DNAJC11Q9NVH1 559 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 ZNF358Q9NW07 568 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 GPRC5BQ9NZH0 403 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 NUDT4Q9NZJ9 180 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 COPG2Q9UBF2 871 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 ZNF180Q9UJW8 692 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 C3orf18Q9UK00 162 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 FBXL4Q9UKA2 621 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC22A7Q9Y694 548 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 USP9XQ93008 2570 aaPredicted RBP10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 ZNF860A6NHJ4 632 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 A6NL46 340 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 IDSB3KWA1 339 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 SUPT3HB4E1H0 165 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 PRPF4O43172 522 aaKnown RBP eCLIP10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 RDH16O75452 317 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 SUPT3HO75486 399 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 KLHL18O94889 574 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 TBX6O95947 436 aaPredicted RBP10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 TYK2P29597 1187 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 MSH2P43246 934 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 AVPR1BP47901 424 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 RRADP55042 308 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 Q0VFX4 171 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 RAPSNQ13702 412 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 E2F2Q14209 437 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 SLBPQ14493 270 aaKnown RBP eCLIP10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 RBBP7Q16576 425 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 PDK4Q16654 411 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 FAM83EQ2M2I3 478 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 TECRLQ5HYJ1 363 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 TEX35Q5T0J7 233 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 ASB18Q6ZVZ8 466 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 TRMT10CQ7L0Y3 403 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 LRRC70Q7Z2Q7 622 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 VN1R5Q7Z5H4 357 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 ZNF605Q86T29 641 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 AMER2Q8N7J2 671 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 OR5T3Q8NGG3 340 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 UTP15Q8TED0 518 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 C8orf44Q96CB5 159 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 WDR34Q96EX3 536 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 CD244Q9BZW8 370 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 VPS11Q9H270 941 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 EHD1Q9H4M9 534 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 KLHL31Q9H511 634 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 C14orf105Q9NVL8 296 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 HCN3Q9P1Z3 774 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 NAALAD2Q9Y3Q0 740 aa10.4□□□□□ -0.74
SHKBP1-206ENST00000595523 EXOC1LA0A1B0GW35 172 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 A0A1W2PQ72 361 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 CCDC189A1A4V9 331 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 OR2W5A6NFC9 320 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 LRRC14BA6NHZ5 514 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 TRIM49D1C9J1S8 452 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 PEX12O00623 359 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 MAP2K7O14733 419 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 KLK8O60259 260 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 CCNT2O60583 730 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 GALR3O60755 368 aaPredicted RBP10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 BMP10O95393 424 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 IGHEP01854 428 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 S100BP04271 92 aaPredicted RBP10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SERPIND1P05546 499 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF888P0CJ79 500 aaPredicted RBP10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SMIM10L1P0DMW3 83 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 COX6A1P12074 109 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 ALOX12P18054 663 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 XCR1P46094 333 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SERPINB9P50453 376 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 PGDP52209 483 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SOX8P57073 446 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 DOC2AQ14183 400 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SLC29A2Q14542 456 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SETDB1Q15047 1291 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 ACAP2Q15057 778 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 RBBP5Q15291 538 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 DEFB134Q4QY38 66 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 TMIGD1Q6UXZ0 262 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 PRICKLE2Q7Z3G6 844 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 GALNT16Q8N428 558 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 TBC1D19Q8N5T2 526 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 SNX31Q8N9S9 440 aa10.39□□□□□ -0.75
SHKBP1-206ENST00000595523 TRPV3Q8NET8 790 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms