RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SLC12A2P55011 1212 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 CDKL1Q00532 357 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 RGS1Q08116 209 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 RPUSD3Q6P087 351 aaKnown RBP22.16■■□□□ 1.14
LSM4-204ENST00000594828 AFAP1L2Q8N4X5 818 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 AMER2Q8N7J2 671 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 ANKRD49Q8WVL7 239 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 PEX11GQ96HA9 241 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 MCMBPQ9BTE3 642 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 SPNS1Q9H2V7 528 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 POPDC3Q9HBV1 291 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 CTNNAL1Q9UBT7 734 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 OARD1Q9Y530 152 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 KCNE2Q9Y6J6 123 aa22.16■■□□□ 1.14
LSM4-204ENST00000594828 ZNF860A6NHJ4 632 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 EIF3HO15372 352 aaKnown RBP eCLIP22.15■■□□□ 1.14
LSM4-204ENST00000594828 SEC24DO94855 1032 aaPredicted RBP22.15■■□□□ 1.14
LSM4-204ENST00000594828 ALOX12P18054 663 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 CASQ1P31415 396 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 AHRP35869 848 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 SCTRP47872 440 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 AGTR2P50052 363 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 HNMTP50135 292 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 TNFSF10P50591 281 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 SKP1P63208 163 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 NXPE4Q6UWF7 544 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 FRA10AC1Q70Z53 315 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 ANKRD37Q7Z713 158 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 ADAMTSL2Q86TH1 951 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 ST6GALNAC3Q8NDV1 305 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 NT5CQ8TCD5 201 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 FAR1Q8WVX9 515 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 CDKL2Q92772 493 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 AIF1LQ9BQI0 150 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 PELI2Q9HAT8 420 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 TXNDC16Q9P2K2 825 aa22.15■■□□□ 1.14
LSM4-204ENST00000594828 MTO1Q9Y2Z2 717 aaKnown RBP22.15■■□□□ 1.14
LSM4-204ENST00000594828 RP1L1Q8IWN7 2480 aaPredicted RBP22.15■■□□□ 1.14
LSM4-204ENST00000594828 TRAV17A0A0B4J275 112 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 GALR3O60755 368 aaPredicted RBP22.14■■□□□ 1.13
LSM4-204ENST00000594828 DDAH2O95865 285 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 POU4F1Q01851 419 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 C2orf54Q08AI8 447 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 TSNQ15631 228 aaKnown RBP22.14■■□□□ 1.13
LSM4-204ENST00000594828 BTBD16Q32M84 506 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 DEFB134Q4QY38 66 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 ABHD17BQ5VST6 288 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 NIPAL1Q6NVV3 410 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 FAM180AQ6UWF9 173 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 TMPRSS11BQ86T26 416 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 OR5T3Q8NGG3 340 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 OR1F2PQ96R84 312 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.14■■□□□ 1.13
LSM4-204ENST00000594828 STMN3Q9NZ72 180 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 TEKT2Q9UIF3 430 aa22.14■■□□□ 1.13
LSM4-204ENST00000594828 LRRK2Q5S007 2527 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 CXorf49A8MYA2 514 aaPredicted RBP22.13■■□□□ 1.13
LSM4-204ENST00000594828 CDC123O75794 336 aaPredicted RBP22.13■■□□□ 1.13
LSM4-204ENST00000594828 WDPCPO95876 746 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 F10P00742 488 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 ZNF888P0CJ79 500 aaPredicted RBP22.13■■□□□ 1.13
LSM4-204ENST00000594828 RNF224P0DH78 156 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 REEP5Q00765 189 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 RBBP5Q15291 538 aaKnown RBP22.13■■□□□ 1.13
LSM4-204ENST00000594828 NSDHLQ15738 373 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 PLAG1Q6DJT9 500 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 C3orf62Q6ZUJ4 267 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 ABHD13Q7L211 337 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 PLPP5Q8NEB5 264 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 TRPV3Q8NET8 790 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 RBCK1Q9BYM8 510 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 GRHL1Q9NZI5 618 aa22.13■■□□□ 1.13
LSM4-204ENST00000594828 PLEKHB1Q9UF11 243 aaPredicted RBP22.13■■□□□ 1.13
LSM4-204ENST00000594828 ERRFI1Q9UJM3 462 aaPredicted RBP22.13■■□□□ 1.13
LSM4-204ENST00000594828 UTP11Q9Y3A2 253 aaKnown RBP22.13■■□□□ 1.13
LSM4-204ENST00000594828 PRRC2CQ9Y520 2896 aaKnown RBP22.13■■□□□ 1.13
LSM4-204ENST00000594828 URADA6NGE7 173 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 A8MUI8 341 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 CHST10O43529 356 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 EDN3P14138 238 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 RHAGQ02094 409 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 ZNF33BQ06732 778 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 ACTN3Q08043 901 aaPredicted RBP22.12■■□□□ 1.13
LSM4-204ENST00000594828 USP10Q14694 798 aaKnown RBP22.12■■□□□ 1.13
LSM4-204ENST00000594828 ABRAXAS2Q15018 415 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 CYS1Q717R9 158 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 ANKRD53Q8N9V6 530 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 UTP15Q8TED0 518 aaKnown RBP22.12■■□□□ 1.13
LSM4-204ENST00000594828 TBC1D20Q96BZ9 403 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 RHBDF1Q96CC6 855 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 TSPAN17Q96FV3 270 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 MAGEB10Q96LZ2 347 aaPredicted RBP22.12■■□□□ 1.13
LSM4-204ENST00000594828 CPNE1Q99829 537 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 UNKQ9C0B0 810 aaKnown RBP22.12■■□□□ 1.13
LSM4-204ENST00000594828 DERL2Q9GZP9 239 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 RNF32Q9H0A6 362 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 CAB39LQ9H9S4 337 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 LANCL2Q9NS86 450 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 SLC5A6Q9Y289 635 aa22.12■■□□□ 1.13
LSM4-204ENST00000594828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms