RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CD63P08962 238 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 NUDT17P0C025 328 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 CHIT1Q13231 466 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 DSG2Q14126 1118 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 SLBPQ14493 270 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRIM47-206ENST00000592942 NDUFA9Q16795 377 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 SYT16Q17RD7 645 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 VWA2Q5GFL6 755 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 ADNP2Q6IQ32 1131 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 BORAQ6PGQ7 559 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 TMIGD1Q6UXZ0 262 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 SNX31Q8N9S9 440 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 STT3BQ8TCJ2 826 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 MMABQ96EY8 250 aaPredicted RBP14.53□□□□□ -0.08
TRIM47-206ENST00000592942 SEMA4CQ9C0C4 833 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 SLC6A16Q9GZN6 736 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 WDR54Q9H977 334 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 CPSF2Q9P2I0 782 aaKnown RBP14.53□□□□□ -0.08
TRIM47-206ENST00000592942 OPTCQ9UBM4 332 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 HELZ2Q9BYK8 2649 aaKnown RBP14.53□□□□□ -0.08
TRIM47-206ENST00000592942 MED13Q9UHV7 2174 aa14.53□□□□□ -0.08
TRIM47-206ENST00000592942 CCDC151A5D8V7 595 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 C4orf51C9J302 202 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 H0YIG0 161 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 NDUFS4O43181 175 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 SERPINA6P08185 405 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 ZGLP1P0C6A0 271 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 GFAPP14136 432 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 CXCR2P25025 360 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 EFNA3P52797 238 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 MAT1AQ00266 395 aaKnown RBP14.52□□□□□ -0.09
TRIM47-206ENST00000592942 XKR6Q5GH73 641 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 SHISA6Q6ZSJ9 500 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.52□□□□□ -0.092e-9■■■■□ 25.8
TRIM47-206ENST00000592942 MREGQ8N565 214 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 TEX9Q8N6V9 391 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 PTGR2Q8N8N7 351 aaPredicted RBP14.52□□□□□ -0.09
TRIM47-206ENST00000592942 LSM14AQ8ND56 463 aaKnown RBP14.52□□□□□ -0.09
TRIM47-206ENST00000592942 TRPV3Q8NET8 790 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 UTP15Q8TED0 518 aaKnown RBP14.52□□□□□ -0.09
TRIM47-206ENST00000592942 THAP4Q8WY91 577 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 PHF21BQ96EK2 531 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 PTCD3Q96EY7 689 aaKnown RBP14.52□□□□□ -0.09
TRIM47-206ENST00000592942 SCYL1Q96KG9 808 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 MESP1Q9BRJ9 268 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 TGIF2Q9GZN2 237 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 PITHD1Q9GZP4 211 aaPredicted RBP14.52□□□□□ -0.09
TRIM47-206ENST00000592942 MRPL46Q9H2W6 279 aaKnown RBP14.52□□□□□ -0.09
TRIM47-206ENST00000592942 RHBGQ9H310 441 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 SOX17Q9H6I2 414 aaPredicted RBP14.52□□□□□ -0.09
TRIM47-206ENST00000592942 PPCSQ9HAB8 311 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 ZBTB26Q9HCK0 441 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 EMCNQ9ULC0 261 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 POLHQ9Y253 713 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 PADI2Q9Y2J8 665 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 MAP4K5Q9Y4K4 846 aa14.52□□□□□ -0.09
TRIM47-206ENST00000592942 LRIT2A6NDA9 550 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 SMIM23A6NLE4 172 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 STX16-NPEPL1H3BU86 382 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 SGK494L7N484 410 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 STX16O14662 325 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 ERLIN1O75477 346 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 SERPIND1P05546 499 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 SLC35G6P0C7Q6 338 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 EPB42P16452 691 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 IL1RNP18510 177 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 FBLP22087 321 aaKnown RBP14.51□□□□□ -0.09
TRIM47-206ENST00000592942 FOLR3P41439 243 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 IRF8Q02556 426 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 LY6DQ14210 128 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 METTL2BQ6P1Q9 378 aaKnown RBP14.51□□□□□ -0.09
TRIM47-206ENST00000592942 PPP1R32Q7Z5V6 425 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 LCA5Q86VQ0 697 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 APLFQ8IW19 511 aaPredicted RBP14.51□□□□□ -0.09
TRIM47-206ENST00000592942 LAS2Q8IYD9 372 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 KRT78Q8N1N4 520 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 TBC1D19Q8N5T2 526 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 ZCCHC10Q8TBK6 192 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 APOBEC4Q8WW27 367 aaKnown RBP14.51□□□□□ -0.09
TRIM47-206ENST00000592942 TRIM55Q9BYV6 548 aa14.51□□□□□ -0.09
TRIM47-206ENST00000592942 ZNF282Q9UDV7 671 aaPredicted RBP14.51□□□□□ -0.09
TRIM47-206ENST00000592942 TNPO3Q9Y5L0 923 aaKnown RBP14.51□□□□□ -0.09
TRIM47-206ENST00000592942 A8MT66 165 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 OR7A17O14581 309 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 DLX3O60479 287 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 GALR3O60755 368 aaPredicted RBP14.5□□□□□ -0.09
TRIM47-206ENST00000592942 CDH16O75309 829 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 CLEC3AO75596 197 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 BMP10O95393 424 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 GSTA1P08263 222 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 FAM87AP0C7U9 286 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 ZNF888P0CJ79 500 aaPredicted RBP14.5□□□□□ -0.09
TRIM47-206ENST00000592942 ALOX12P18054 663 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 MMP11P24347 488 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 EEF1DP29692 281 aaKnown RBP14.5□□□□□ -0.09
TRIM47-206ENST00000592942 HNRNPH1P31943 449 aaKnown RBP14.5□□□□□ -0.09
TRIM47-206ENST00000592942 CCR10P46092 362 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 AVPR1BP47901 424 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 POLE2P56282 527 aa14.5□□□□□ -0.09
TRIM47-206ENST00000592942 SLC18A2Q05940 514 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms