RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 AHRP35869 848 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 ELK3P41970 407 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 ARL4CP56559 192 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 CDKL1Q00532 357 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 MEF2AQ02078 507 aaPredicted RBP12.51□□□□□ -0.41
APOC1-209ENST00000592885 RHAGQ02094 409 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 CSHL1Q14406 222 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 ABRAXAS2Q15018 415 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 MEP1AQ16819 746 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 PPP1R3AQ16821 1122 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 ZNF787Q6DD87 383 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 PAPD4Q6PIY7 484 aaKnown RBP12.51□□□□□ -0.41
APOC1-209ENST00000592885 SBSNQ6UWP8 590 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 ABHD13Q7L211 337 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 IGDCC3Q8IVU1 814 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 NKAPQ8N5F7 415 aaKnown RBP12.51□□□□□ -0.41
APOC1-209ENST00000592885 SLC5A8Q8N695 610 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 ZNF740Q8NDX6 193 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 OR4K3Q96R72 315 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 LPAR4Q99677 370 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 MACROD1Q9BQ69 325 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 KCNK13Q9HB14 408 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 LANCL2Q9NS86 450 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 NSMCE4AQ9NXX6 385 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 STMN3Q9NZ72 180 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 ZFATQ9P243 1243 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 ZFP69BQ9UJL9 534 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 SVILO95425 2214 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 NOTCH2Q04721 2471 aa12.51□□□□□ -0.41
APOC1-209ENST00000592885 CCDC188H7C350 402 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 FHP07954 510 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 SCTRP47872 440 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 HNMTP50135 292 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 TAS2R50P59544 299 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 REEP5Q00765 189 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 DR1Q01658 176 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 RBPJQ06330 500 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 MGAT5Q09328 741 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 USP10Q14694 798 aaKnown RBP12.5□□□□□ -0.41
APOC1-209ENST00000592885 NSDHLQ15738 373 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 ZXDCQ2QGD7 858 aaPredicted RBP12.5□□□□□ -0.41
APOC1-209ENST00000592885 SFT2D3Q587I9 215 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 ZNF766Q5HY98 468 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 ACER2Q5QJU3 275 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 GFRALQ6UXV0 394 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 QSOX2Q6ZRP7 698 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 TICAM1Q8IUC6 712 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 LURAP1LQ8IV03 231 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 BEST3Q8N1M1 668 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 TRPV3Q8NET8 790 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 NEIL2Q969S2 332 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 TBC1D20Q96BZ9 403 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 PYCR2Q96C36 320 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 PEX11GQ96HA9 241 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 OLFM1Q99784 485 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 WDR83Q9BRX9 315 aaKnown RBP12.5□□□□□ -0.41
APOC1-209ENST00000592885 POPDC3Q9HBV1 291 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 SLC17A6Q9P2U8 582 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 SUCOQ9UBS9 1254 aaKnown RBP12.5□□□□□ -0.41
APOC1-209ENST00000592885 ENTPD4Q9Y227 616 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 DYRK1BQ9Y463 629 aa12.5□□□□□ -0.41
APOC1-209ENST00000592885 DIDO1Q9BTC0 2240 aaKnown RBP12.5□□□□□ -0.41
APOC1-209ENST00000592885 SCN3AQ9NY46 2000 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 IGHV3-20A0A0C4DH32 117 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 SEC31AO94979 1220 aaKnown RBP12.49□□□□□ -0.41
APOC1-209ENST00000592885 GUCA1CO95843 209 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 F10P00742 488 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 COL8A1P27658 744 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 GSTM2P28161 218 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 CBLBQ13191 982 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 TUBA3CQ13748 450 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 DEFB134Q4QY38 66 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 TUBA3EQ6PEY2 450 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 TRMT10BQ6PF06 316 aaKnown RBP12.49□□□□□ -0.41
APOC1-209ENST00000592885 ADAMTSL2Q86TH1 951 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 FJX1Q86VR8 437 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 ZC3HC1Q86WB0 502 aaKnown RBP12.49□□□□□ -0.41
APOC1-209ENST00000592885 HORMAD2Q8N7B1 307 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 MDS2Q8NDY4 140 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 AIF1LQ9BQI0 150 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 UTP23Q9BRU9 249 aaKnown RBP12.49□□□□□ -0.41
APOC1-209ENST00000592885 SLC6A16Q9GZN6 736 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 TRMT1Q9NXH9 659 aaKnown RBP12.49□□□□□ -0.41
APOC1-209ENST00000592885 SEC14L3Q9UDX4 400 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 OARD1Q9Y530 152 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 KCNE2Q9Y6J6 123 aa12.49□□□□□ -0.41
APOC1-209ENST00000592885 FAM95CA0A1B0GW59 222 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 SYNDIG1LA6NDD5 238 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 ZNF860A6NHJ4 632 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 A8MUI8 341 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 E7ESA3 106 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 TTI1O43156 1089 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 ZG16O60844 167 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 UNC5CO95185 931 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 ITGA8P53708 1063 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 KCNK10P57789 538 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 OR4D2P58180 307 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 SLC26A5P58743 744 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms