RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NCF1CA8MVU1 366 aaPredicted RBP13.11□□□□□ -0.31
APOC1-208ENST00000592535 PCDH17O14917 1159 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 FAM155BO75949 473 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 WDR47O94967 919 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 B3GALT4O96024 378 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 SERPINA7P05543 415 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 NCF1P14598 390 aaPredicted RBP13.11□□□□□ -0.31
APOC1-208ENST00000592535 STMN1P16949 149 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
APOC1-208ENST00000592535 GMPRP36959 345 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 GDF5P43026 501 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 MAGEA4P43358 317 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 GLRBP48167 497 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 HNMTP50135 292 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 SLC7A5Q01650 507 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
APOC1-208ENST00000592535 MFAP5Q13361 173 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 MRPL49Q13405 166 aaKnown RBP13.11□□□□□ -0.31
APOC1-208ENST00000592535 PWP1Q13610 501 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 KBTBD12Q3ZCT8 623 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 CRB2Q5IJ48 1285 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 NXPE4Q6UWF7 544 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 AFAP1L2Q8N4X5 818 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 FAM26EQ8N5C1 309 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 TBC1D19Q8N5T2 526 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 SIRT6Q8N6T7 355 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 ANKRD53Q8N9V6 530 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 OR5T3Q8NGG3 340 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 DNAJB14Q8TBM8 379 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 METTL21AQ8WXB1 218 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 RHBDF1Q96CC6 855 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 PEX11GQ96HA9 241 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 CNDP1Q96KN2 507 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 C16orf45Q96MC5 204 aaPredicted RBP13.11□□□□□ -0.31
APOC1-208ENST00000592535 CYTH2Q99418 400 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 AIF1LQ9BQI0 150 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 RBCK1Q9BYM8 510 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 SLC29A3Q9BZD2 475 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 LRRC4CQ9HCJ2 640 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 PTGFRNQ9P2B2 879 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 NTNG1Q9Y2I2 539 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 KCNE2Q9Y6J6 123 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 SETXQ7Z333 2677 aaKnown RBP13.11□□□□□ -0.31
APOC1-208ENST00000592535 GALR3O60755 368 aaPredicted RBP13.1□□□□□ -0.31
APOC1-208ENST00000592535 DNAJB6O75190 326 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 ZNF888P0CJ79 500 aaPredicted RBP13.1□□□□□ -0.31
APOC1-208ENST00000592535 CCDC166P0CW27 439 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 ITGAMP11215 1152 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 CD1DP15813 335 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 ALOX12P18054 663 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 SOX11P35716 441 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 AHRP35869 848 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 SLC6A12P48065 614 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 OLR1P78380 273 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 RGS1Q08116 209 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 EFTUD2Q15029 972 aaKnown RBP eCLIP13.1□□□□□ -0.318e-9■■■■■ 30.6
APOC1-208ENST00000592535 HERC3Q15034 1050 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 RBBP5Q15291 538 aaKnown RBP13.1□□□□□ -0.31
APOC1-208ENST00000592535 TGFBIQ15582 683 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 ZKSCAN8Q15776 578 aaPredicted RBP13.1□□□□□ -0.31
APOC1-208ENST00000592535 DEFB134Q4QY38 66 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 C8orf74Q6P047 294 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 KLHDC8AQ8IYD2 350 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 PPM1NQ8N819 430 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 CATSPER1Q8NEC5 780 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 FBF1Q8TES7 1133 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 TRIM44Q96DX7 344 aaPredicted RBP13.1□□□□□ -0.31
APOC1-208ENST00000592535 IMMP1LQ96LU5 166 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 LMF1Q96S06 567 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 TMEM79Q9BSE2 394 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 LRRC1Q9BTT6 524 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 COPG1Q9Y678 874 aaKnown RBP13.1□□□□□ -0.31
APOC1-208ENST00000592535 RELNP78509 3460 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 FLNCQ14315 2725 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 PTPN13Q12923 2485 aa13.1□□□□□ -0.31
APOC1-208ENST00000592535 RP1L1Q8IWN7 2480 aaPredicted RBP13.1□□□□□ -0.31
APOC1-208ENST00000592535 TAPBPO15533 448 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 CDC123O75794 336 aaPredicted RBP13.09□□□□□ -0.31
APOC1-208ENST00000592535 WFS1O76024 890 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 URI1O94763 535 aaPredicted RBP13.09□□□□□ -0.31
APOC1-208ENST00000592535 SEC24DO94855 1032 aaPredicted RBP13.09□□□□□ -0.31
APOC1-208ENST00000592535 CYC1P08574 325 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 STX2P32856 288 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 SPRP35270 261 aaPredicted RBP13.09□□□□□ -0.31
APOC1-208ENST00000592535 HNF4AP41235 474 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 RAB10P61026 200 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 RHAGQ02094 409 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 GUCY2DQ02846 1103 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 HYAL2Q12891 473 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 ZNF169Q14929 603 aaPredicted RBP13.09□□□□□ -0.31
APOC1-208ENST00000592535 NR6A1Q15406 480 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 OR4D1Q15615 310 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 FBXO48Q5FWF7 155 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 GRTP1Q5TC63 336 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 B3GNTL1Q67FW5 361 aaPredicted RBP13.09□□□□□ -0.31
APOC1-208ENST00000592535 SLCO4C1Q6ZQN7 724 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
APOC1-208ENST00000592535 CPEB2Q7Z5Q1 589 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms