RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TMEM88BA6NKF7 163 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 SLC16A5O15375 505 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 TSPAN6O43657 245 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 SLC15A1P46059 708 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 SMU1Q2TAY7 513 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 CRB2Q5IJ48 1285 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 COMMD3Q9UBI1 195 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 PRSS21Q9Y6M0 314 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 PORP16435 677 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 KHKP50053 298 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 DOC2AQ14183 400 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 PTPRRQ15256 657 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 RUNDC3AQ59EK9 446 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 SLC5A11Q8WWX8 675 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 OMA1Q96E52 524 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 IGFLR1Q9H665 355 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 CLEC4AQ9UMR7 237 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 WDR37Q9Y2I8 494 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 C4BPBP20851 252 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 CRISP3P54108 245 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 KLHL22Q53GT1 634 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 MACC1Q6ZN28 852 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 CXXC5Q7LFL8 322 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 AMZ2Q86W34 360 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 FAM20CQ8IXL6 584 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 ADGRG2Q8IZP9 1017 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 LRRC17Q8N6Y2 441 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 HERC2P3Q9BVR0 1158 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 TUBB1Q9H4B7 451 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 DNAJC27Q9NZQ0 273 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 PLAGL1Q9UM63 463 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 HSPE1-MOB4S4R3N1 261 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 RNASE12Q5GAN4 147 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 C17orf99Q6UX52 265 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 MAL2Q969L2 176 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 MND1Q9BWT6 205 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 MIR1-1HGQ9H1L0 117 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 ZCCHC3Q9NUD5 404 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 SRRDQ9UH36 339 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 TAC3Q9UHF0 121 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 DLGAP4Q9Y2H0 992 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 CFAP20Q9Y6A4 193 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 DCKP27707 260 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 PIK3CBP42338 1070 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 SP140LQ9H930 580 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 PSIP1O75475 530 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 HOXD8P13378 290 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 TYRP14679 529 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 CRHBPP24387 322 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 TUBA3EQ6PEY2 450 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 CRTC1Q6UUV9 634 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 NUDT13Q86X67 352 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 DCP2Q8IU60 420 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 TEX37Q96LM6 180 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 ELAC1Q9H777 363 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 ENPP5Q9UJA9 477 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 GSAPA4D1B5 854 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 GTF2E2P29084 291 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 CCR4P51679 360 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 NCCRP1Q6ZVX7 275 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 IGFN1Q86VF2 1251 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 FAM129CQ86XR2 697 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 SCAIQ8N9R8 606 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 OR10G6Q8NH81 332 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 ABCD2Q9UBJ2 740 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 PMF1-BGLAPU3KQ54 211 aa16.53■□□□□ 0.24
SMARCA4-215ENST00000590574 TNFRSF10BO14763 440 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 LAMP1P11279 417 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 CSTF2P33240 577 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 PGFP49763 221 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 CCR8P51685 355 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 TMEM115Q12893 351 aaPredicted RBP16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 PPIGQ13427 754 aaKnown RBP eCLIP16.52■□□□□ 0.241e-6■■■□□ 15.5
SMARCA4-215ENST00000590574 CHDHQ8NE62 594 aaPredicted RBP16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 RFKQ969G6 155 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 SLITRK2Q9H156 845 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 PHPT1Q9NRX4 125 aaPredicted RBP16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 MRPL39Q9NYK5 338 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 SCAMP1O15126 338 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 SCAMP2O15127 329 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 SSNA1O43805 119 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 ALPLP05186 524 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 STSP08842 583 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 RPL4P36578 427 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 CLEC12AQ5QGZ9 265 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 ANKRD13BQ86YJ7 626 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 FAM46DQ8NEK8 389 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 SLCO4A1Q96BD0 722 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 SLC30A2Q9BRI3 323 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 ACPTQ9BZG2 426 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 PCBD2Q9H0N5 130 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 P2RX2Q9UBL9 471 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 AASSQ9UDR5 926 aa16.52■□□□□ 0.24
SMARCA4-215ENST00000590574 A0A1B0GTW7 788 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 TIA1P31483 386 aaKnown RBP eCLIP16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 PRR5P85299 388 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 TSPYL5Q86VY4 417 aaPredicted RBP16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF514Q96K75 400 aaPredicted RBP16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 ANKRA2Q9H9E1 313 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms