RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ZSCAN9O15535 394 aaPredicted RBP20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 SRPX2O60687 465 aaPredicted RBP20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 WFS1O76024 890 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 GCGRP47871 477 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 SCTRP47872 440 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 RPS15AP62244 130 aaKnown RBP20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 HERVK_113P63132 956 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 IRF8Q02556 426 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 PCLAFQ15004 111 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 ZNF678Q5SXM1 525 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 GPR135Q8IZ08 494 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 CSNK1A1LQ8N752 337 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 GALNT6Q8NCL4 622 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 OR52B6Q8NGF0 335 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 WDR34Q96EX3 536 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 C1QTNF3Q9BXJ4 246 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 ERVK-6Q9BXR3 956 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 CAPS2Q9BXY5 557 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 IQCGQ9H095 443 aaKnown RBP20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 SEMA4BQ9NPR2 832 aaPredicted RBP20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 COPG2Q9UBF2 871 aa20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 ZNF490Q9ULM2 529 aaPredicted RBP20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 TMEM184BQ9Y519 407 aaPredicted RBP20.45■□□□□ 0.86
R3HDM4-206ENST00000590454 KCNE1BA0A087WTH5 132 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 IMPDH1P20839 514 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 MAGOHP61326 146 aaKnown RBP20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 ABHD18Q0P651 414 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 RBBP5Q15291 538 aaKnown RBP20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 PRTGQ2VWP7 1150 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 CRTC2Q53ET0 693 aaPredicted RBP20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 CYB5D1Q6P9G0 228 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 C10orf107Q8IVU9 208 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 RDH11Q8TC12 318 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 PTCD3Q96EY7 689 aaKnown RBP20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 CDK15Q96Q40 435 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 AIF1LQ9BQI0 150 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 MECRQ9BV79 373 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 SARGQ9BW04 601 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 ACTR5Q9H9F9 607 aaPredicted RBP20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 DHCR7Q9UBM7 475 aaKnown RBP20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 RUVBL1Q9Y265 456 aaKnown RBP20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 PCDHB3Q9Y5E6 796 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 FER1L5A0AVI2 2057 aa20.44■□□□□ 0.86
R3HDM4-206ENST00000590454 TEX15Q9BXT5 2789 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 FITM1A5D6W6 292 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 KATNA1O75449 491 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 ATXN8OSP0DMR3 200 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 TCN2P20062 427 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 GRK3P35626 688 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 CASP2P42575 452 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 ETV4P43268 484 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 PCDH1Q08174 1060 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 GPS2Q13227 327 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 E2F2Q14209 437 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 TCTE1Q5JU00 501 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 C1orf189Q5VU69 101 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 LCN10Q6JVE6 187 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 METTL2BQ6P1Q9 378 aaKnown RBP20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 TLDC1Q6P9B6 456 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 VN1R5Q7Z5H4 357 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 SLC22A9Q8IVM8 553 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 ARHGEF39Q8N4T4 335 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 TEX19Q8NA77 164 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 TRPC4APQ8TEL6 797 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 STARD8Q92502 1023 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 RERGQ96A58 199 aaPredicted RBP20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 TM4SF19Q96DZ7 209 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 L3HYPDHQ96EM0 354 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 C10orf90Q96M02 699 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 EHD1Q9H4M9 534 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 VIPAS39Q9H9C1 493 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 SSU72Q9NP77 194 aaKnown RBP20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 ENAMQ9NRM1 1142 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 OXSMQ9NWU1 459 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 PLEKHB1Q9UF11 243 aaPredicted RBP20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 TP53TG5Q9Y2B4 290 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 MRPS2Q9Y399 296 aaKnown RBP20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 RNF11Q9Y3C5 154 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 ACTL7BQ9Y614 415 aa20.43■□□□□ 0.86
R3HDM4-206ENST00000590454 HYKKA2RU49 373 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 GOLGA6L10A6NI86 522 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 H2AFYO75367 372 aaKnown RBP20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 SUPT7LO94864 414 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 ALDH3A1P30838 453 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 RORAP35398 523 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 NAGLUP54802 743 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 TRAF3Q13114 568 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 TBCCQ15814 346 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 TTMPQ5BVD1 217 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 HIST2H2BCQ6DN03 193 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 ASPGQ86U10 573 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 CCNYL1Q8N7R7 359 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 THAP11Q96EK4 314 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 SH3GL2Q99962 352 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 AICDAQ9GZX7 198 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 GSTO2Q9H4Y5 243 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 ACTR8Q9H981 624 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 KCNK9Q9NPC2 374 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 ZNF225Q9UK10 706 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms