RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 NDUFS4O43181 175 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 ESRRBO95718 433 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 SERPIND1P05546 499 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 PIM1P11309 404 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-220ENST00000588917 CD22P20273 847 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 AGXTP21549 392 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 ALAS2P22557 587 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 GRK2P25098 689 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 PIK3CBP42338 1070 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 SKP1P63208 163 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 FAM53BQ14153 422 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 CPSF6Q16630 551 aaKnown RBP eCLIP18.66■□□□□ 0.58
CIRBP-220ENST00000588917 TTC19Q6DKK2 380 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-220ENST00000588917 GPRIN3Q6ZVF9 776 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 VN1R4Q7Z5H5 301 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 TRIM42Q8IWZ5 723 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 ESX1Q8N693 406 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 ANKRD53Q8N9V6 530 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 PMEPA1Q969W9 287 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 MVB12AQ96EY5 273 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 MED4Q9NPJ6 270 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 STARD5Q9NSY2 213 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 CUTCQ9NTM9 273 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 FOXJ2Q9P0K8 574 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 SNX6Q9UNH7 406 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 IGSF10Q6WRI0 2623 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 ENO1P06733 434 aaKnown RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 CD63P08962 238 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 PCNAP12004 261 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 PCBP4P57723 403 aaKnown RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 STXBP1P61764 594 aaKnown RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 ZNF33BQ06732 778 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 ABHD18Q0P651 414 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 IFT88Q13099 833 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 TRAF3Q13114 568 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 ZRSR2Q15696 482 aaKnown RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 HKDC1Q2TB90 917 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 SOWAHCQ53LP3 525 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 PRMT9Q6P2P2 845 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 TTLL10Q6ZVT0 673 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 CHSY3Q70JA7 882 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 RPS27LQ71UM5 84 aaKnown RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 NLGN4XQ8N0W4 816 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 SRFBP1Q8NEF9 429 aaKnown RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 NLGN4YQ8NFZ3 816 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 METTL6Q8TCB7 284 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 CDK15Q96Q40 435 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 C17orf62Q9BQA9 187 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 MECRQ9BV79 373 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 FAM117AQ9C073 453 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 MID1IP1Q9NPA3 183 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 RUVBL1Q9Y265 456 aaKnown RBP18.65■□□□□ 0.58
CIRBP-220ENST00000588917 SLC22A7Q9Y694 548 aa18.65■□□□□ 0.58
CIRBP-220ENST00000588917 WDR91A4D1P6 747 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 MEN1O00255 615 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 FOXE1O00358 373 aaPredicted RBP18.64■□□□□ 0.57
CIRBP-220ENST00000588917 DSCR3O14972 297 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 TIAF1O95411 115 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 DLGAP3O95886 979 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 KRT6AP02538 564 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 KRT6BP04259 564 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 CTSBP07858 339 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 LIPCP11150 499 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 ZNF28P17035 718 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 TSPAN8P19075 237 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 PTX3P26022 381 aaPredicted RBP18.64■□□□□ 0.57
CIRBP-220ENST00000588917 GCGRP47871 477 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 KRT6CP48668 564 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 TGM3Q08188 693 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 FRG2Q64ET8 278 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 ABHD13Q7L211 337 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 ZNF248Q8NDW4 579 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 CREB3L4Q8TEY5 395 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 CMTM7Q96FZ5 175 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 FRG2BQ96QU4 278 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 CENPKQ9BS16 269 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 SLC29A3Q9BZD2 475 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 ELOVL6Q9H5J4 265 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 NDOR1Q9UHB4 597 aa18.64■□□□□ 0.57
CIRBP-220ENST00000588917 A0A087WV48 116 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 A0A1B0GX78 115 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 PPP6CO00743 305 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 OR4F21O95013 312 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 HMOX2P30519 316 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 AVPR1BP47901 424 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 ATP1A2P50993 1020 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 PPP2R2AP63151 447 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 DCDP81605 110 aaKnown RBP18.63■□□□□ 0.57
CIRBP-220ENST00000588917 HERC3Q15034 1050 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 TMEM35AQ53FP2 167 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 TMEM214Q6NUQ4 689 aaKnown RBP18.63■□□□□ 0.57
CIRBP-220ENST00000588917 SYVN1Q86TM6 617 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 ZFAND4Q86XD8 727 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 DTX1Q86Y01 620 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.63■□□□□ 0.57
CIRBP-220ENST00000588917 DSELQ8IZU8 1212 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 KIRREL3Q8IZU9 778 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 SLC38A9Q8NBW4 561 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 GALNT6Q8NCL4 622 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 OR6Y1Q8NGX8 325 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms