RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 KCNK10P57789 538 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 DR1Q01658 176 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 SRSF11Q05519 484 aaKnown RBP17.7■□□□□ 0.42
TRIM47-205ENST00000587774 CATSPEREQ5SY80 951 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 FCRLBQ6BAA4 426 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 KLHL7Q8IXQ5 586 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 NEIL2Q969S2 332 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 FBXL8Q96CD0 374 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 SNF8Q96H20 258 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 TRIM51Q9BSJ1 452 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 SPNS1Q9H2V7 528 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 GRPEL1Q9HAV7 217 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 LANCL2Q9NS86 450 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 TEKT2Q9UIF3 430 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 VWA7Q9Y334 891 aa17.7■□□□□ 0.42
TRIM47-205ENST00000587774 TRBC2A0A5B9 178 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 A8MUI8 341 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 PRAMEF2O60811 474 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 ZG16O60844 167 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 ENO2P09104 434 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-205ENST00000587774 ZNF37AP17032 561 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-205ENST00000587774 RHAGQ02094 409 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 ABRAXAS2Q15018 415 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 HERC3Q15034 1050 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 PPP1R3AQ16821 1122 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 C1QL3Q5VWW1 255 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 TMEM207Q6UWW9 146 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 SYDE1Q6ZW31 735 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-205ENST00000587774 FJX1Q86VR8 437 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 BEST3Q8N1M1 668 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 AFAP1L2Q8N4X5 818 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 LRRC39Q96DD0 335 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 TSNARE1Q96NA8 513 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 OR1F2PQ96R84 312 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 TRIM54Q9BYV2 358 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 STMN3Q9NZ72 180 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 PSAT1Q9Y617 370 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 CSMD2Q7Z408 3487 aa17.69■□□□□ 0.42
TRIM47-205ENST00000587774 GALR3O60755 368 aaPredicted RBP17.68■□□□□ 0.42
TRIM47-205ENST00000587774 SEC31AO94979 1220 aaKnown RBP17.68■□□□□ 0.42
TRIM47-205ENST00000587774 RASAL1O95294 804 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 B3GALT4O96024 378 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 SERPIND1P05546 499 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 ITGA8P53708 1063 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 OLR1P78380 273 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 PMP22Q01453 160 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 PWP1Q13610 501 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 ZNF460Q14592 562 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 ZRSR2Q15696 482 aaKnown RBP17.68■□□□□ 0.42
TRIM47-205ENST00000587774 DEFB134Q4QY38 66 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 SFT2D3Q587I9 215 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 H3F3CQ6NXT2 135 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 PAPD4Q6PIY7 484 aaKnown RBP17.68■□□□□ 0.42
TRIM47-205ENST00000587774 CREG2Q8IUH2 290 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 ANKMY2Q8IV38 441 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 SUN3Q8TAQ9 357 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 SLC5A11Q8WWX8 675 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 ATL1Q8WXF7 558 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 TSLPQ969D9 159 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 KCNK13Q9HB14 408 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 ZFATQ9P243 1243 aa17.68■□□□□ 0.42
TRIM47-205ENST00000587774 PKDREJQ9NTG1 2253 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 A0A1B0GUH1 482 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 CTAGE15A4D2H0 777 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 TP73O15350 636 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 TTI1O43156 1089 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 DNAJB6O75190 326 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 ZNF888P0CJ79 500 aaPredicted RBP17.67■□□□□ 0.42
TRIM47-205ENST00000587774 ALOX12P18054 663 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 SAT1P21673 171 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 MST1P26927 711 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 CSHL1Q14406 222 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 FASTKD3Q14CZ7 662 aaKnown RBP17.67■□□□□ 0.42
TRIM47-205ENST00000587774 NSDHLQ15738 373 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 EXT1Q16394 746 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 ACER2Q5QJU3 275 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 GFRALQ6UXV0 394 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 STRA8Q7Z7C7 330 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 CTAGE6Q86UF2 777 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 CRLF3Q8IUI8 442 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 NT5CQ8TCD5 201 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 PDLIM5Q96HC4 596 aaKnown RBP17.67■□□□□ 0.42
TRIM47-205ENST00000587774 RUNDC3BQ96NL0 473 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 NPAS2Q99743 824 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 ABI3Q9P2A4 366 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 TACC2O95359 2948 aa17.67■□□□□ 0.42
TRIM47-205ENST00000587774 NPEPPSL1A6NEC2 478 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 MAGEB17A8MXT2 336 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 CDC7O00311 574 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 MAN1A2O60476 641 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 UNC5CO95185 931 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 CRYABP02511 175 aaKnown RBP17.66■□□□□ 0.42
TRIM47-205ENST00000587774 FHP07954 510 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 IL10P22301 178 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 SCTRP47872 440 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 ST13P50502 369 aaKnown RBP17.66■□□□□ 0.42
TRIM47-205ENST00000587774 ARL4CP56559 192 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 REEP5Q00765 189 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 RGS1Q08116 209 aa17.66■□□□□ 0.42
TRIM47-205ENST00000587774 FRG1Q14331 258 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms