RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	ZNF358	Q9NW07	568 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	UTP6	Q9NYH9	597 aa	Known RBP	13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	ADAM21	Q9UKJ8	722 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	PLEKHA6	Q9Y2H5	1048 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	JMJD1C	Q15652	2540 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263		A0A1W2PPV9	198 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	CCDC162P	A2VCL2	907 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	PROM1	O43490	865 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	MAN1A2	O60476	641 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	PRMT3	O60678	531 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	C1orf105	O95561	183 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	PKM	P14618	531 aa	Known RBP	13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	TPH1	P17752	444 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	ECHS1	P30084	290 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	CCNF	P41002	786 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	DGKQ	P52824	942 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	PTK6	Q13882	451 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	SLMAP	Q14BN4	828 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	SIX1	Q15475	284 aa	Predicted RBP	13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263		Q71RC1	249 aa	Predicted RBP	13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	CAMKMT	Q7Z624	323 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	ANKRD37	Q7Z713	158 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	CCDC71	Q8IV32	467 aa	Predicted RBP	13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	ARHGEF39	Q8N4T4	335 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	MAGEC3	Q8TD91	643 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	C18orf12	Q96KH6	178 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	ACAT2	Q9BWD1	397 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	SPATA7	Q9P0W8	599 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	WHRN	Q9P202	907 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	MTRF1L	Q9UGC7	380 aa	Known RBP	13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	L3MBTL1	Q9Y468	752 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	HRH3	Q9Y5N1	445 aa		13.84	□□□□□ -0.19
RANBP3-208	ENST00000587263	MROH6	A6NGR9	719 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263		H0YIG0	161 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	CDC40	O60508	579 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	GAS8	O95995	478 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	TFEB	P19484	476 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	AOAH	P28039	575 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	ADSL	P30566	484 aa	Predicted RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	PPARG	P37231	505 aa	Predicted RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	BDKRB1	P46663	353 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	YBX1	P67809	324 aa	Known RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	KLF1	Q13351	362 aa	Predicted RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	CCSMST1	Q4G0I0	132 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	ARHGAP11A	Q6P4F7	1023 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	PAPD4	Q6PIY7	484 aa	Known RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	CCDC137	Q6PK04	289 aa	Known RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	AFTPH	Q6ULP2	937 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	LKAAEAR1	Q8TD35	194 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	SKA2	Q8WVK7	121 aa	Predicted RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	MBD6	Q96DN6	1003 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	FOPNL	Q96NB1	174 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	OR2A5	Q96R48	311 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	FMO2	Q99518	471 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	LPAR4	Q99677	370 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	MDFI	Q99750	246 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	TXLNGY	Q9BZA5	131 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	LRRC40	Q9H9A6	602 aa		13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	MRPS30	Q9NP92	439 aa	Known RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	DRG1	Q9Y295	367 aa	Known RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.83	□□□□□ -0.2
RANBP3-208	ENST00000587263	IQCF5	A8MTL0	148 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	ZNF189	O75820	626 aa	Predicted RBP	13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	TJP3	O95049	919 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	RBP3	P10745	1247 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	EZR	P15311	586 aa	Known RBP	13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	CYB561	P49447	251 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	PMPCA	Q10713	525 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	KCTD11	Q693B1	232 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	CLEC9A	Q6UXN8	241 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	PAQR7	Q86WK9	346 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	RPS19BP1	Q86WX3	136 aa	Known RBP	13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	ZZZ3	Q8IYH5	903 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	RPRML	Q8N4K4	120 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	ACTL9	Q8TC94	416 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	MCOLN3	Q8TDD5	553 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	SMR3A	Q99954	134 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	GPATCH1	Q9BRR8	931 aa	Known RBP	13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	TMEM109	Q9BVC6	243 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	HEMGN	Q9BXL5	484 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	SLC6A16	Q9GZN6	736 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	CDCP1	Q9H5V8	836 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	SYNPO2L	Q9H987	977 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	ZDHHC18	Q9NUE0	388 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	NFS1	Q9Y697	457 aa		13.82	□□□□□ -0.2
RANBP3-208	ENST00000587263	KRT87P	A6NCN2	255 aa		13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	GOLGA6L10	A6NI86	522 aa		13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	POLR3G	O15318	223 aa	Predicted RBP	13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	HS6ST1	O60243	411 aa		13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	NSA2	O95478	260 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	INHBB	P09529	407 aa		13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	NUDT17	P0C025	328 aa		13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	RPA3	P35244	121 aa	Predicted RBP	13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	XCR1	P46094	333 aa		13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	MARCKSL1	P49006	195 aa		13.81	□□□□□ -0.2
RANBP3-208	ENST00000587263	NUP107	P57740	925 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms