RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CSNK1G2P78368 415 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 NANOGP8Q6NSW7 305 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 ATOH1Q92858 354 aaPredicted RBP19.58■□□□□ 0.73
ATG4D-204ENST00000586417 GSDMCQ9BYG8 508 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 NANOGQ9H9S0 305 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 NMRK1Q9NWW6 199 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 HEATR5BQ9P2D3 2071 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 TRBV23OR9-2A0A075B6M9 112 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 MYO1DO94832 1006 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 CXCR2P25025 360 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 AP2B1P63010 937 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 SLC34A1Q06495 639 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 TRAP1Q12931 704 aaKnown RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 RBBP5Q15291 538 aaKnown RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 MAPKAPK3Q16644 382 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 UGT8Q16880 541 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 SPATS1Q496A3 300 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 PLA2G2CQ5R387 149 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 LAIR1Q6GTX8 287 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 RABEPKQ7Z6M1 372 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 BHLHE22Q8NFJ8 381 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 PATE1Q8WXA2 126 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 JPH3Q8WXH2 748 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 OR52E6Q96RD3 313 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 CGREF1Q99674 301 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 PITHD1Q9GZP4 211 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 SPHK1Q9NYA1 384 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 PCDHGA5Q9Y5G8 931 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 ARID1BQ8NFD5 2236 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 AQP9O43315 295 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 KDM1AO60341 852 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 ANXA4P09525 319 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 ANPEPP15144 967 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 ATXN3P54252 364 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 PHEXP78562 749 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 COMMD6Q7Z4G1 85 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 METTL4Q8N3J2 472 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 SLC25A45Q8N413 288 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 GFM2Q969S9 779 aaKnown RBP19.57■□□□□ 0.72
ATG4D-204ENST00000586417 PPM1MQ96MI6 270 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 TWSG1Q9GZX9 223 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 SERHLQ9NQF3 203 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 SPASTQ9UBP0 616 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 ADGRE2Q9UHX3 823 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 MAN2B2Q9Y2E5 1009 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 OTOGLQ3ZCN5 2332 aa19.57■□□□□ 0.72
ATG4D-204ENST00000586417 C15orf38-AP3S2A0A0A6YYH1 394 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 FEZF1A0PJY2 475 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 H3BNX3 289 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 ARHGAP33O14559 1287 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 YY2O15391 372 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 PCDH7O60245 1069 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 KCNH1O95259 989 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 S100A3P33764 101 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 SHMT2P34897 504 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 RXRGP48443 463 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 PLIN5Q00G26 463 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 ELOCQ15369 112 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 RNF111Q6ZNA4 994 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 ARPINQ7Z6K5 226 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 AMIGO1Q86WK6 493 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 MSRB3Q8IXL7 192 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 FAM46DQ8NEK8 389 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 CXorf40BQ96DE9 158 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 GAREM1Q9H706 876 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 SLC6A20Q9NP91 592 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 OR6C2Q9NZP2 312 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 BCAP29Q9UHQ4 241 aa19.56■□□□□ 0.72
ATG4D-204ENST00000586417 SAP18O00422 153 aaKnown RBP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 AKAP10O43572 662 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 DFNA5O60443 496 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 KLHL18O94889 574 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 B3GALT4O96024 378 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 PTX3P26022 381 aaPredicted RBP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 GCKP35557 465 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 PTDSS1P48651 473 aaKnown RBP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 ARRB1P49407 418 aaPredicted RBP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 GSK3BP49841 420 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 DPY19L1Q2PZI1 675 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 DEFB133Q30KQ1 61 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 IYDQ6PHW0 289 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 FAM20CQ8IXL6 584 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 OR2L3Q8NG85 312 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 WDR48Q8TAF3 677 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 LCN9Q8WX39 176 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 MS4A8Q9BY19 250 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 PRM3Q9NNZ6 103 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 VAPAQ9P0L0 249 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 STOML1Q9UBI4 398 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 GMEB2Q9UKD1 530 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 GOLGA4Q13439 2230 aaKnown RBP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 TRBV5-3A0A0A0MS03 114 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 A0A1B0GTQ1 180 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 DNAJA2O60884 412 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 SNRNP200O75643 2136 aaKnown RBP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 CHRM5P08912 532 aaPredicted RBP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 HOXB9P17482 250 aaPredicted RBP19.55■□□□□ 0.72
ATG4D-204ENST00000586417 SERPINB1P30740 379 aa19.55■□□□□ 0.72
ATG4D-204ENST00000586417 ASMTP46597 345 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms