RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 HMOX2P30519 316 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 SCTRP47872 440 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 CDH13P55290 713 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 DNAJB13P59910 316 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 RPS15P62841 145 aaKnown RBP13.22□□□□□ -0.29
TRAF4-215ENST00000584944 DCDP81605 110 aaKnown RBP13.22□□□□□ -0.29
TRAF4-215ENST00000584944 MANEAQ5SRI9 462 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 GARNL3Q5VVW2 1013 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 GRHL2Q6ISB3 625 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 NIPAL1Q6NVV3 410 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 GPRIN3Q6ZVF9 776 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 C10orf107Q8IVU9 208 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF843Q8N446 348 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 ZSCAN1Q8NBB4 408 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF740Q8NDX6 193 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 ZCCHC10Q8TBK6 192 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 PROKR1Q8TCW9 393 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 MGARPQ8TDB4 240 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF483Q8TF39 744 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-215ENST00000584944 TMEM237Q96Q45 408 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 EFHD1Q9BUP0 239 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 NT5DC2Q9H857 520 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 GPN2Q9H9Y4 310 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-215ENST00000584944 ANKHQ9HCJ1 492 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 IFT80Q9P2H3 777 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-215ENST00000584944 DHCR7Q9UBM7 475 aaKnown RBP13.22□□□□□ -0.29
TRAF4-215ENST00000584944 SNX6Q9UNH7 406 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 TMEM120BA0PK00 339 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 WDR91A4D1P6 747 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 H3BQF6 201 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 MEN1O00255 615 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 DSCR3O14972 297 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 HCRTR1O43613 425 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 TYROBPO43914 113 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 LCMT2O60294 686 aaKnown RBP13.21□□□□□ -0.29
TRAF4-215ENST00000584944 KRT6AP02538 564 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 KRT6BP04259 564 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 CD63P08962 238 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 CREB1P16220 341 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 TSPAN8P19075 237 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 CASP2P42575 452 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 GABRA4P48169 554 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 KRT6CP48668 564 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 RAP1GDS1P52306 607 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 EMP3P54852 163 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 UCNP55089 124 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 PKNOX1P55347 436 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 MAP7Q14244 749 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 HERC3Q15034 1050 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 HKDC1Q2TB90 917 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 SGO1Q5FBB7 561 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 C10orf62Q5T681 223 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-215ENST00000584944 ARHGAP40Q5TG30 622 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 PRAMEF17Q5VTA0 474 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 RHBDD2Q6NTF9 364 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 PRMT9Q6P2P2 845 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 CHSY3Q70JA7 882 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.21□□□□□ -0.296e-8■■■■□ 19.9
TRAF4-215ENST00000584944 TMEM151AQ8N4L1 468 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 WDR34Q96EX3 536 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 MMABQ96EY8 250 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-215ENST00000584944 NSUN5Q96P11 429 aaKnown RBP13.21□□□□□ -0.29
TRAF4-215ENST00000584944 CDK15Q96Q40 435 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 C1QTNF3Q9BXJ4 246 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 DPH1Q9BZG8 443 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 COPS7BQ9H9Q2 264 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-215ENST00000584944 MID1IP1Q9NPA3 183 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 NMRK1Q9NWW6 199 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 ACSL6Q9UKU0 697 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 RUVBL1Q9Y265 456 aaKnown RBP13.21□□□□□ -0.29
TRAF4-215ENST00000584944 PADI2Q9Y2J8 665 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 TMEM184BQ9Y519 407 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-215ENST00000584944 PCM1Q15154 2024 aa13.21□□□□□ -0.29
TRAF4-215ENST00000584944 SETXQ7Z333 2677 aaKnown RBP13.21□□□□□ -0.3
TRAF4-215ENST00000584944 FITM1A5D6W6 292 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.2□□□□□ -0.3
TRAF4-215ENST00000584944 ERVH48-1M5A8F1 160 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 FFAR3O14843 346 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 BIRC5O15392 142 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 GPR42O15529 346 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 CLEC3AO75596 197 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 WFS1O76024 890 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 ZIC2O95409 532 aaPredicted RBP13.2□□□□□ -0.3
TRAF4-215ENST00000584944 CHEK2O96017 543 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 SERPINA6P08185 405 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 ZNF28P17035 718 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 TCN2P20062 427 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 FBLP22087 321 aaKnown RBP13.2□□□□□ -0.3
TRAF4-215ENST00000584944 ALDH3A1P30838 453 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 SERPINB4P48594 390 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 TMPRSS3P57727 454 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 RHDQ02161 417 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 PCLAFQ15004 111 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 ZRSR2Q15696 482 aaKnown RBP13.2□□□□□ -0.3
TRAF4-215ENST00000584944 NKAIN1Q4KMZ8 207 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 UNC50Q53HI1 259 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 TOR1AIP1Q5JTV8 583 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 MLIPQ5VWP3 458 aa13.2□□□□□ -0.3
TRAF4-215ENST00000584944 TRIM40Q6P9F5 258 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms