RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 PTCD3Q96EY7 689 aaKnown RBP15.42■□□□□ 0.06
ERBB2-222ENST00000584908 TRIM55Q9BYV6 548 aa15.42■□□□□ 0.06
ERBB2-222ENST00000584908 ING2Q9H160 280 aa15.42■□□□□ 0.06
ERBB2-222ENST00000584908 SLC25A18Q9H1K4 315 aa15.42■□□□□ 0.06
ERBB2-222ENST00000584908 SEMA3GQ9NS98 782 aa15.42■□□□□ 0.06
ERBB2-222ENST00000584908 ZNF358Q9NW07 568 aa15.42■□□□□ 0.06
ERBB2-222ENST00000584908 TRPC4Q9UBN4 977 aa15.42■□□□□ 0.06
ERBB2-222ENST00000584908 A0A1W2PQ72 361 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 ARGFXA6NJG6 315 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 K7EPI3 171 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 CCNT2O60583 730 aaKnown RBP15.41■□□□□ 0.06
ERBB2-222ENST00000584908 WFS1O76024 890 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 SERPINA6P08185 405 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 OTX2P32243 289 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 AGTR2P50052 363 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 RGS1Q08116 209 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 SLBPQ14493 270 aaKnown RBP eCLIP15.41■□□□□ 0.06
ERBB2-222ENST00000584908 PCBP2Q15366 365 aaKnown RBP eCLIP15.41■□□□□ 0.06
ERBB2-222ENST00000584908 VWA2Q5GFL6 755 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 CPZQ66K79 652 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 NIPAL1Q6NVV3 410 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 PRSS41Q7RTY9 318 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 LCA5Q86VQ0 697 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 PDSS2Q86YH6 399 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 KRT78Q8N1N4 520 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 ZNF843Q8N446 348 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 OR9A4Q8NGU2 314 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 ABHD17AQ96GS6 310 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 CCDC77Q9BR77 488 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 EFCAB11Q9BUY7 163 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 SOX17Q9H6I2 414 aaPredicted RBP15.41■□□□□ 0.06
ERBB2-222ENST00000584908 PPCSQ9HAB8 311 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 ANKHQ9HCJ1 492 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 MLXIPLQ9NP71 852 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 P4HTMQ9NXG6 502 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 PSMC3IPQ9P2W1 217 aaPredicted RBP15.41■□□□□ 0.06
ERBB2-222ENST00000584908 OPTCQ9UBM4 332 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 PCDHGA9Q9Y5G4 932 aaKnown RBP15.41■□□□□ 0.06
ERBB2-222ENST00000584908 HS3ST3B1Q9Y662 390 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 DOCK10Q96BY6 2186 aa15.41■□□□□ 0.06
ERBB2-222ENST00000584908 IQANK1A0A1B0GTG1 560 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 MKRN2OSH3BPM6 223 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 AGPSO00116 658 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 SOCS6O14544 535 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 PCDH17O14917 1159 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 GALR3O60755 368 aaPredicted RBP15.4■□□□□ 0.06
ERBB2-222ENST00000584908 CYC1P08574 325 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 SMIM10L1P0DMW3 83 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 ALOX12P18054 663 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 IL1RNP18510 177 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 CD22P20273 847 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 SOX8P57073 446 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 VSNL1P62760 191 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 LAPTM5Q13571 262 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 DOC2AQ14183 400 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 RASA2Q15283 850 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 RBBP5Q15291 538 aaKnown RBP15.4■□□□□ 0.06
ERBB2-222ENST00000584908 PFKFB4Q16877 469 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 DCAF10Q5QP82 559 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 TCTN3Q6NUS6 607 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 WDR93Q6P2C0 686 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 TDRPQ86YL5 185 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 ZC3H7AQ8IWR0 971 aaKnown RBP15.4■□□□□ 0.06
ERBB2-222ENST00000584908 SNX31Q8N9S9 440 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 C9orf43Q8TAL5 461 aaPredicted RBP15.4■□□□□ 0.06
ERBB2-222ENST00000584908 ACMSDQ8TDX5 336 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 MZB1Q8WU39 189 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 SMIM10Q96HG1 83 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 RHBGQ9H310 441 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 CLK4Q9HAZ1 481 aaKnown RBP15.4■□□□□ 0.06
ERBB2-222ENST00000584908 ZNF490Q9ULM2 529 aaPredicted RBP15.4■□□□□ 0.06
ERBB2-222ENST00000584908 TMCO1Q9UM00 188 aa15.4■□□□□ 0.06
ERBB2-222ENST00000584908 TNPO3Q9Y5L0 923 aaKnown RBP15.4■□□□□ 0.06
ERBB2-222ENST00000584908 URADA6NGE7 173 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 PEX12O00623 359 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 CLEC3AO75596 197 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 DNAJB5O75953 348 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 KLHL18O94889 574 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 BMP10O95393 424 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 GFAPP14136 432 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 EPB42P16452 691 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 SKP1P63208 163 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 CHIT1Q13231 466 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 SYT16Q17RD7 645 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 ADPRMQ3LIE5 342 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 XKR6Q5GH73 641 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 KIRREL2Q6UWL6 708 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 SHISA6Q6ZSJ9 500 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 ABHD13Q7L211 337 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 LAPTM4BQ86VI4 370 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.39■□□□□ 0.052e-8■■■■□ 23.1
ERBB2-222ENST00000584908 TMEM151AQ8N4L1 468 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 ZCCHC10Q8TBK6 192 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 UTP15Q8TED0 518 aaKnown RBP15.39■□□□□ 0.05
ERBB2-222ENST00000584908 FER1L6-AS2Q96M78 137 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 MRPL57Q9BQC6 102 aaKnown RBP15.39■□□□□ 0.05
ERBB2-222ENST00000584908 CRB3Q9BUF7 120 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 AICDAQ9GZX7 198 aa15.39■□□□□ 0.05
ERBB2-222ENST00000584908 MRPL46Q9H2W6 279 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms