RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SMC6Q96SB8 1091 aa13.21□□□□□ -0.29
CSNK1D-224ENST00000584672 PKP4Q99569 1192 aa13.21□□□□□ -0.29
CSNK1D-224ENST00000584672 TRIM45Q9H8W5 580 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-224ENST00000584672 ANKHQ9HCJ1 492 aa13.21□□□□□ -0.29
CSNK1D-224ENST00000584672 LANCL2Q9NS86 450 aa13.21□□□□□ -0.29
CSNK1D-224ENST00000584672 CATSPERZQ9NTU4 200 aa13.21□□□□□ -0.29
CSNK1D-224ENST00000584672 UTP6Q9NYH9 597 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-224ENST00000584672 CBLCQ9ULV8 474 aa13.21□□□□□ -0.29
CSNK1D-224ENST00000584672 ATRQ13535 2644 aa13.21□□□□□ -0.3
CSNK1D-224ENST00000584672 MAGEB17A8MXT2 336 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 G3V3Y1 287 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 SMAPO00193 183 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 FCHO1O14526 889 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 TRHRP34981 398 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 PPIAP62937 165 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 OLR1P78380 273 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 ANKRD20A4Q4UJ75 823 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 FLYWCH1Q4VC44 716 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 THEMIS2Q5TEJ8 643 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 TMEM156Q8N614 296 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 KCT2Q8NC54 265 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 PLPP5Q8NEB5 264 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 DEFB126Q9BYW3 111 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 OSBPL8Q9BZF1 889 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 P2RY12Q9H244 342 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 NEUROD4Q9HD90 331 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 DEPPQ9NTK1 212 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 ALKBH4Q9NXW9 302 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 TFR2Q9UP52 801 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 NAALAD2Q9Y3Q0 740 aa13.2□□□□□ -0.3
CSNK1D-224ENST00000584672 MPDZO75970 2070 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 A0A0G2JMM0 328 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 A0A1W2PPB8 328 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 A0A1W2PRS3 328 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 FIGNL2A6NMB9 653 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 KIR3DP1A8MWS1 328 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 SMAD7O15105 426 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 B4GALT2O60909 372 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 DNAJB6O75190 326 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 NIPSNAP2O75323 286 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 SYF2O95926 243 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 B3GALT4O96024 378 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 GRIA1P42261 906 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 GDF10P55107 478 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 CDH17Q12864 832 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 AARS2Q5JTZ9 985 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 CTSL3PQ5NE16 218 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 TMEM214Q6NUQ4 689 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 PAOXQ6QHF9 649 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 PPP1R21Q6ZMI0 780 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 CIARTQ8N365 385 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 OTUD6BQ8N6M0 293 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 NHEJ1Q9H9Q4 299 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 KCMF1Q9P0J7 381 aa13.19□□□□□ -0.3
CSNK1D-224ENST00000584672 EML6Q6ZMW3 1958 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 TRBV11-1A0A0K0K1C0 115 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 FEZF1A0PJY2 475 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 INAFM1C9JVW0 142 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 H7C1Q1 480 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 MYO1CO00159 1063 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 KPNA5O15131 536 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 CD3EAPO15446 510 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 MATN4O95460 622 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 SLC16A8O95907 504 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 TACR1P25103 407 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 COILP38432 576 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 DCAF7P61962 342 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 NKX6-1P78426 367 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 ACVR1Q04771 509 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 PCBP2Q15366 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 SLC25A35Q3KQZ1 300 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 ACSBG2Q5FVE4 666 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 MEI1Q5TIA1 1274 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 C16orf47Q6ZP98 133 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 LINC00523Q86TU6 105 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 OR8K1Q8NGG5 319 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 ZNF480Q8WV37 535 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 MRFAP1L1Q96HT8 127 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 PTCHD1Q96NR3 888 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 DNAJC7Q99615 494 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 CNPPD1Q9BV87 410 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 ZNHIT6Q9NWK9 470 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 GALPQ9UBC7 116 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 ADAM21Q9UKJ8 722 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 FBXW2Q9UKT8 454 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 ARHGAP21Q5T5U3 1957 aa13.18□□□□□ -0.3
CSNK1D-224ENST00000584672 NBEAL1Q6ZS30 2694 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 SAGE2PA6NJ88 616 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 E7ENX8 843 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 NDUFS3O75489 264 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 ITGA10O75578 1167 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 GAS8O95995 478 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 TUBB4AP04350 444 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 FHP07954 510 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 FMO4P31512 558 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms