RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 UBXN10Q96LJ8 280 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 AGAP4Q96P64 663 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 CNOT10Q9H9A5 744 aaKnown RBP19.33■□□□□ 0.68
SS18-224ENST00000584083 RNF112Q9ULX5 631 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 MYO18BQ8IUG5 2567 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 ZNF860A6NHJ4 632 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 PCDH17O14917 1159 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 C1GALT1C1LP0DN25 315 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 COX6A1P12074 109 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 VARSP26640 1264 aaKnown RBP19.32■□□□□ 0.68
SS18-224ENST00000584083 Q0VFX4 171 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 CDC16Q13042 620 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 CDKL4Q5MAI5 379 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 SULT1C3Q6IMI6 304 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 ATCAYQ86WG3 371 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 PDSS2Q86YH6 399 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 KBTBD2Q8IY47 623 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 KLHDC8AQ8IYD2 350 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 TRPV3Q8NET8 790 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 NT5CQ8TCD5 201 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 KIAA1191Q96A73 305 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 CYTH2Q99418 400 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 TSPYL1Q9H0U9 437 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 ZBTB20Q9HC78 741 aaPredicted RBP19.32■□□□□ 0.68
SS18-224ENST00000584083 NINJ2Q9NZG7 142 aa19.32■□□□□ 0.68
SS18-224ENST00000584083 CNTRLQ7Z7A1 2325 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 TAPBPO15533 448 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 SORBS2O94875 1100 aaKnown RBP19.31■□□□□ 0.68
SS18-224ENST00000584083 ZNF888P0CJ79 500 aaPredicted RBP19.31■□□□□ 0.68
SS18-224ENST00000584083 SLC35E2BP0CK96 405 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 C8orf89P0DMQ9 161 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 ALOX12P18054 663 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 HNF4AP41235 474 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 HSPA7P48741 367 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 CD97P48960 835 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 SKP1P63208 163 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 PLEKHN1Q494U1 663 aaPredicted RBP19.31■□□□□ 0.68
SS18-224ENST00000584083 DEFB134Q4QY38 66 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 GLE1Q53GS7 698 aaKnown RBP19.31■□□□□ 0.68
SS18-224ENST00000584083 FBXO48Q5FWF7 155 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 MROH9Q5TGP6 573 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 IGFL3Q6UXB1 125 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 SLCO4C1Q6ZQN7 724 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 SNX31Q8N9S9 440 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 ANKRD53Q8N9V6 530 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 CPT1CQ8TCG5 803 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 MIB2Q96AX9 1013 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 FMO2Q99518 471 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 CAPS2Q9BXY5 557 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 VN1R1Q9GZP7 353 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 ALG9Q9H6U8 611 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 NMRAL1Q9HBL8 299 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 DNAJC11Q9NVH1 559 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 MAP10Q9P2G4 905 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 B3GNT3Q9Y2A9 372 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 ACOT9Q9Y305 439 aa19.31■□□□□ 0.68
SS18-224ENST00000584083 IGHV1-45A0A0A0MS14 117 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 URADA6NGE7 173 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 CLGNO14967 610 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 LTA4HP09960 611 aaKnown RBP19.3■□□□□ 0.68
SS18-224ENST00000584083 TFEBP19484 476 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 GGT5P36269 586 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 BMPR2Q13873 1038 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 TMEM205Q6UW68 189 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 ABHD13Q7L211 337 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 SHISA5Q8N114 240 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 AFAP1L2Q8N4X5 818 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 Q8NA96 180 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 STAG3L4Q8TBR4 150 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 ESAMQ96AP7 390 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 PEX11GQ96HA9 241 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 TMEM79Q9BSE2 394 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 ILKAPQ9H0C8 392 aaPredicted RBP19.3■□□□□ 0.68
SS18-224ENST00000584083 RIC8BQ9NVN3 520 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 GPRC5BQ9NZH0 403 aa19.3■□□□□ 0.68
SS18-224ENST00000584083 LOC102723996A0A087X1L8 192 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 SUPT3HB4E1H0 165 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 GALR3O60755 368 aaPredicted RBP19.29■□□□□ 0.68
SS18-224ENST00000584083 SUPT3HO75486 399 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 STK16O75716 305 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 ACSL3O95573 720 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 B3GALT4O96024 378 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 UQCRHP07919 91 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 EFNA3P52797 238 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 RAB8AP61006 207 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 DLG1Q12959 904 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 SLBPQ14493 270 aaKnown RBP eCLIP19.29■□□□□ 0.68
SS18-224ENST00000584083 TOR1AIP1Q5JTV8 583 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 NIPAL1Q6NVV3 410 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 ISLR2Q6UXK2 745 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 TMIGD1Q6UXZ0 262 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 ISCA2Q86U28 154 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 RELL1Q8IUW5 271 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 KRT78Q8N1N4 520 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 PDPRQ8NCN5 879 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 OR5T3Q8NGG3 340 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 UTP15Q8TED0 518 aaKnown RBP19.29■□□□□ 0.68
SS18-224ENST00000584083 RBCK1Q9BYM8 510 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 ZNF700Q9H0M5 742 aa19.29■□□□□ 0.68
SS18-224ENST00000584083 CDC42EP4Q9H3Q1 356 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms