RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 BEST3Q8N1M1 668 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 SLC5A8Q8N695 610 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 TMEM178AQ8NBL3 297 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 C2CD4AQ8NCU7 369 aaPredicted RBP8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 DNAJB8Q8NHS0 232 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 SLC13A3Q8WWT9 602 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 CERS2Q96G23 380 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 PEX11GQ96HA9 241 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 MAGED4Q96JG8 741 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 IMMP1LQ96LU5 166 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 ZNF354BQ96LW1 612 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 LPAR4Q99677 370 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 MACROD1Q9BQ69 325 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 HAUS8Q9BT25 410 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 NAT9Q9BTE0 207 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 TRIM54Q9BYV2 358 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 PARVBQ9HBI1 364 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 PPANQ9NQ55 473 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 ARL15Q9NXU5 204 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 STMN3Q9NZ72 180 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 ADAMTS6Q9UKP5 1117 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 PDE10AQ9Y233 779 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 NAALAD2Q9Y3Q0 740 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 UTP20O75691 2785 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 USP9XQ93008 2570 aaPredicted RBP8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 HEATR5BQ9P2D3 2071 aa8.22□□□□□ -1.09
CDK5RAP3-229ENST00000583697 USP9YO00507 2555 aaPredicted RBP8.21□□□□□ -1.09
CDK5RAP3-229ENST00000583697 NAV2Q8IVL1 2488 aa8.21□□□□□ -1.09
CDK5RAP3-229ENST00000583697 ZNF860A6NHJ4 632 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 FAM227AF5H4B4 570 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CCL21O00585 134 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SERPIND1P05546 499 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CD46P15529 392 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 IL10P22301 178 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 IVDP26440 423 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CA7P43166 264 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CCR8P51685 355 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PLTPP55058 493 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 AP1S2P56377 157 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ACTN3Q08043 901 aaPredicted RBP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RGS1Q08116 209 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ABRAXAS2Q15018 415 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 HERC3Q15034 1050 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NSDHLQ15738 373 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SFT2D3Q587I9 215 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ACER2Q5QJU3 275 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RBM20Q5T481 1227 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RNASEH2BQ5TBB1 312 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 FCRLBQ6BAA4 426 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 FAM45BPQ6NSW5 357 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RPTNQ6XPR3 784 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 KIAA0408Q6ZU52 694 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 MRGPRGQ86SM5 289 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SLC26A11Q86WA9 606 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CRLF3Q8IUI8 442 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SPNS2Q8IVW8 549 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ZNF808Q8N4W9 903 aaPredicted RBP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 HORMAD2Q8N7B1 307 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 GPATCH11Q8N954 259 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 KCT2Q8NC54 265 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 FAM45AQ8TCE6 357 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 EEF1AKMT1Q8WVE0 214 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ATL1Q8WXF7 558 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RELTQ969Z4 430 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CCDC120Q96HB5 630 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SIGLEC10Q96LC7 697 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 OR1F2PQ96R84 312 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CYTH2Q99418 400 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 UTP23Q9BRU9 249 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SGPP1Q9BX95 441 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 KLHL1Q9NR64 748 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ANKRD10Q9NXR5 420 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 WHRNQ9P202 907 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 DMGDHQ9UI17 866 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CORO1CQ9ULV4 474 aaPredicted RBP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SH2B3Q9UQQ2 575 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 KLF2Q9Y5W3 355 aaPredicted RBP8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SLC22A7Q9Y694 548 aa8.21□□□□□ -1.1
CDK5RAP3-229ENST00000583697 URADA6NGE7 173 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 GABRR3A8MPY1 467 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 MAGEB17A8MXT2 336 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PSMD12O00232 456 aaPredicted RBP8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 OR1F1O43749 312 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SLC19A2O60779 497 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 GUCA1CO95843 209 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 FHP07954 510 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ENO2P09104 434 aaPredicted RBP8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ESRRAP11474 423 aaPredicted RBP8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 MST1P26927 711 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RPL21P46778 160 aaKnown RBP8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ITGA8P53708 1063 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CDKN2DP55273 166 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 OR4D2P58180 307 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 IL2P60568 153 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SNRPNP63162 240 aaKnown RBP8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 MEF2AQ02078 507 aaPredicted RBP8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ALDH6A1Q02252 535 aaKnown RBP8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ART3Q13508 389 aa8.2□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TUBA3CQ13748 450 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms