RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 AGTR2P50052 363 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 REEP5Q00765 189 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 ATG9BQ674R7 924 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 LRRC70Q7Z2Q7 622 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 TMPRSS11BQ86T26 416 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 LCA5Q86VQ0 697 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 FDCSPQ8NFU4 85 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 MRPL57Q9BQC6 102 aaKnown RBP23.62■■□□□ 1.37
TSEN54-209ENST00000583454 AIF1LQ9BQI0 150 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 NUDT9Q9BW91 350 aa23.62■■□□□ 1.37
TSEN54-209ENST00000583454 OR1F1O43749 312 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 PRAMEF4O60810 478 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 KLF7O75840 302 aaPredicted RBP23.61■■□□□ 1.37
TSEN54-209ENST00000583454 VARSP26640 1264 aaKnown RBP23.61■■□□□ 1.37
TSEN54-209ENST00000583454 SCTRP47872 440 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 ALDH18A1P54886 795 aaKnown RBP23.61■■□□□ 1.37
TSEN54-209ENST00000583454 SETDB1Q15047 1291 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 PDK4Q16654 411 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 PRAMEF9Q5VWM5 478 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 MRPL14Q6P1L8 145 aaKnown RBP23.61■■□□□ 1.37
TSEN54-209ENST00000583454 PRMT9Q6P2P2 845 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 ASPGQ86U10 573 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 TMEM151AQ8N4L1 468 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 DTWD1Q8N5C7 304 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 TBC1D19Q8N5T2 526 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 Q8NA96 180 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 CAMKVQ8NCB2 501 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 SLC13A3Q8WWT9 602 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 WDR34Q96EX3 536 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 MVB12AQ96EY5 273 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 EHD1Q9H4M9 534 aa23.61■■□□□ 1.37
TSEN54-209ENST00000583454 IFT80Q9P2H3 777 aaPredicted RBP23.61■■□□□ 1.37
TSEN54-209ENST00000583454 TTLL8A6PVC2 850 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 K7EPI3 171 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 CCNT2O60583 730 aaKnown RBP23.6■■□□□ 1.37
TSEN54-209ENST00000583454 CD63P08962 238 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 PIM1P11309 404 aaPredicted RBP23.6■■□□□ 1.37
TSEN54-209ENST00000583454 GP1BBP13224 206 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 GFAPP14136 432 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 EPORP19235 508 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 AHRP35869 848 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 PCDH1Q08174 1060 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 ATP1A4Q13733 1029 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 FAM53BQ14153 422 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 NAA30Q147X3 362 aaPredicted RBP23.6■■□□□ 1.37
TSEN54-209ENST00000583454 PFKFB4Q16877 469 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 SH2D5Q6ZV89 423 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 CYP4X1Q8N118 509 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 MREGQ8N565 214 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 SNX31Q8N9S9 440 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 CPT1CQ8TCG5 803 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 COPG2Q9UBF2 871 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 XPR1Q9UBH6 696 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 ZFP69BQ9UJL9 534 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 MAP4K5Q9Y4K4 846 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 PCDHGB7Q9Y5F8 929 aa23.6■■□□□ 1.37
TSEN54-209ENST00000583454 CLGNO14967 610 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 H2AFYO75367 372 aaKnown RBP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 STATHP02808 62 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 CXCR2P25025 360 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 SLCO1A2P46721 670 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 PWP1Q13610 501 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 E2F2Q14209 437 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 PCBP2Q15366 365 aaKnown RBP eCLIP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 MLIPQ5VWP3 458 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 METTL2BQ6P1Q9 378 aaKnown RBP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 COX15Q7KZN9 410 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 OVCH1Q7RTY7 1134 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 GALNT11Q8NCW6 608 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 EPS8L3Q8TE67 593 aaKnown RBP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 FKBP10Q96AY3 582 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 SCYL1Q96KG9 808 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 MACROD1Q9BQ69 325 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 PITHD1Q9GZP4 211 aaPredicted RBP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 SLC26A1Q9H2B4 701 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 MRPL46Q9H2W6 279 aaKnown RBP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 NT5DC2Q9H857 520 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 CPSF2Q9P2I0 782 aaKnown RBP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 OPTCQ9UBM4 332 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 GPN3Q9UHW5 284 aaPredicted RBP23.59■■□□□ 1.37
TSEN54-209ENST00000583454 TMCO1Q9UM00 188 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 CDC14AQ9UNH5 594 aa23.59■■□□□ 1.37
TSEN54-209ENST00000583454 A0A1W2PPM1 405 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 FOXS1O43638 330 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 CNOT3O75175 753 aaKnown RBP23.58■■□□□ 1.37
TSEN54-209ENST00000583454 CDH16O75309 829 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 ALBP02768 609 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 SBK3P0C264 359 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 PYGBP11216 843 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 GNLYP22749 145 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 CASP2P42575 452 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 OR1D4P47884 311 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 SLC9A5Q14940 896 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 TBCCQ15814 346 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 NDUFA9Q16795 377 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 PRR30Q53SZ7 412 aaPredicted RBP23.58■■□□□ 1.37
TSEN54-209ENST00000583454 TMEM214Q6NUQ4 689 aaKnown RBP23.58■■□□□ 1.37
TSEN54-209ENST00000583454 MED25Q71SY5 747 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 TMEM151BQ8IW70 566 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms