RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 ATG9BQ674R7 924 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 LETMD1Q6P1Q0 360 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 BRAT1Q6PJG6 821 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 CYP20A1Q6UW02 462 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 LINGO4Q6UY18 593 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 CYP2R1Q6VVX0 501 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 Q6ZSR9 355 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 RPS27LQ71UM5 84 aaKnown RBP6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SPPL2CQ8IUH8 684 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SFRP1Q8N474 314 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 GALNT4Q8N4A0 578 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 TRIML2Q8N7C3 387 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 CDYL2Q8N8U2 506 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 GALNT6Q8NCL4 622 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 FAM156AQ8NDB6 213 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 OR4F6Q8NGB9 312 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 PROKR1Q8TCW9 393 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SH3RF2Q8TEC5 729 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 CANT1Q8WVQ1 401 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 ATL1Q8WXF7 558 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 USP7Q93009 1102 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 VPS33AQ96AX1 596 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SDCCAG3Q96C92 435 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 RHBDF1Q96CC6 855 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 OTUB2Q96DC9 234 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 HIST1H2AHQ96KK5 128 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 MRGPRX1Q96LB2 322 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 KCNA7Q96RP8 456 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 CGREF1Q99674 301 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 HIST1H2AJQ99878 128 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 EGFL8Q99944 293 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 TMEM79Q9BSE2 394 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 H2AFJQ9BTM1 129 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SLC12A9Q9BXP2 914 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SUV39H2Q9H5I1 410 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 MAGIXQ9H6Y5 334 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 RMND5AQ9H871 391 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 PARVBQ9HBI1 364 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 BPIFA1Q9NP55 256 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SARS2Q9NP81 518 aaKnown RBP6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SMPD3Q9NY59 655 aaPredicted RBP6.37□□□□□ -1.39
NDEL1-216ENST00000583066 WWOXQ9NZC7 414 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 TBC1D14Q9P2M4 693 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SLC25A13Q9UJS0 675 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 ZNF225Q9UK10 706 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 PACSIN3Q9UKS6 424 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 IKZF3Q9UKT9 509 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 AURKCQ9UQB9 309 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 CLCA2Q9UQC9 943 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 BTRCQ9Y297 605 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 TIMM22Q9Y584 194 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 DNMT3AQ9Y6K1 912 aaPredicted RBP6.37□□□□□ -1.39
NDEL1-216ENST00000583066 SDK2Q58EX2 2172 aa6.37□□□□□ -1.39
NDEL1-216ENST00000583066 NYNRINQ9P2P1 1898 aaKnown RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 TCRBV5S2A0A599 114 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 C7orf72A4D263 438 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 PMS2P1A4D2B8 440 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 LRRC14BA6NHZ5 514 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 NCF1BA6NI72 391 aaPredicted RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 NCF1CA8MVU1 366 aaPredicted RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 PDLIM1O00151 329 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 MANBAO00462 879 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 GAPDHSO14556 408 aaPredicted RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 ANKRD28O15084 1053 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 INPP4BO15327 924 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 CLOCKO15516 846 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 TIPRLO75663 272 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 PRSS23O95084 383 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 LDOC1O95751 146 aaPredicted RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 MT-CO1P00395 513 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 FTH1P02794 183 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 APODP05090 189 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 GSTM1P09488 218 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 PRSS56P0CW18 603 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 HSD3B1P14060 373 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 NCF1P14598 390 aaPredicted RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 TCF3P15923 654 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 BPIP17213 487 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 GGT1P19440 569 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 CYP2A7P20853 494 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 HSD3B2P26439 372 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 CD6P30203 668 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 ARL1P40616 181 aaPredicted RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 PEX19P40855 299 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 GRIA2P42262 883 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 ZFP36L2P47974 494 aaKnown RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 ALDH3B2P48448 385 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 PNLIPRP1P54315 467 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 CLDN8P56748 225 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 C21orf58P58505 322 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 UFM1P61960 85 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 GSTM4Q03013 218 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 CHRNB3Q05901 458 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 PCDH1Q08174 1060 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 BOP1Q14137 746 aaKnown RBP6.36□□□□□ -1.39
NDEL1-216ENST00000583066 GBX1Q14549 363 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 CHRNA6Q15825 494 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 MAPKAPK3Q16644 382 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 IMPG1Q17R60 797 aa6.36□□□□□ -1.39
NDEL1-216ENST00000583066 PLA2G4EQ3MJ16 856 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms