RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SOX3P41225 446 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 IER3P46695 156 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 VEGFCP49767 419 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 PAX9P55771 341 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 XGP55808 180 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 NME5P56597 212 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 CLDN17P56750 224 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 STX1BP61266 288 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 AKAP17AQ02040 695 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 CETN1Q12798 172 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 PM20D1Q6GTS8 502 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 PWWP2BQ6NUJ5 590 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 ARHGAP11AQ6P4F7 1023 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 LEKR1Q6ZMV7 388 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 TCEANCQ8N8B7 351 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 MSANTD4Q8NCY6 345 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 MRGPRDQ8TDS7 321 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 GATAD1Q8WUU5 269 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 CKAP2Q8WWK9 683 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF486Q96H40 463 aaPredicted RBP4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 C17orf62Q9BQA9 187 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 IDI2Q9BXS1 227 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 NACAP1Q9BZK3 213 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 NYXQ9GZU5 481 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 PANK4Q9NVE7 773 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 C2orf42Q9NWW7 574 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 PILRBQ9UKJ0 227 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 ITM2BQ9Y287 266 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 PCDHGA1Q9Y5H4 931 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 A0A1W2PR80 420 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 A0A1W2PRV1 198 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 A8MVM7 634 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 H0YIG0 161 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 MAGEC1O60732 1142 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 KRT33AO76009 404 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 TBX6O95947 436 aaPredicted RBP4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 ATP6V1B1P15313 513 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 MAGEB1P43366 347 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 OR3A2P47893 321 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 NR0B1P51843 470 aaKnown RBP4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 DCDC1P59894 354 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 CSNK2BP67870 215 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 TMEM187Q14656 261 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 MORF4L2Q15014 288 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 SGSM1Q2NKQ1 1148 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 SLC39A12Q504Y0 691 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 FGD3Q5JSP0 725 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 KLHL10Q6JEL2 608 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 TMEM270Q6UE05 265 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 DHRS11Q6UWP2 260 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 COX8CQ7Z4L0 72 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 TDHQ8IZJ6 230 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 WDSUB1Q8N9V3 476 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 AP2M1Q96CW1 435 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 CDKN2AIPNLQ96HQ2 116 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 PRMT1Q99873 361 aaKnown RBP4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 SLC39A8Q9C0K1 460 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 SLC5A7Q9GZV3 580 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 WDR13Q9H1Z4 485 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 C5orf66Q9H5L9 145 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 PLCXD1Q9NUJ7 323 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 ATAD3AQ9NVI7 634 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 HACD3Q9P035 362 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 MTRRQ9UBK8 725 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 ELF5Q9UKW6 265 aaPredicted RBP4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 POMT2Q9UKY4 750 aa4.08□□□□□ -1.76
SMCHD1-205ENST00000581383 SPATA31D1Q6ZQQ2 1576 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 C13orf42A0A1B0GVH6 325 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 MEIOCA2RUB1 952 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 ANKDD1BA6NHY2 528 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 SLCO1B7G3V0H7 640 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 RTCAO00442 366 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 CYTIPO60759 359 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 SAP30O75446 220 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 GLCEO94923 617 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 MT-ND2P03891 347 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 UROSP10746 265 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 CTNNB1P35222 781 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 CDH18Q13634 790 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 ITGA9Q13797 1035 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 EFTUD2Q15029 972 aaKnown RBP eCLIP4.07□□□□□ -1.762e-11■□□□□ 8.6
SMCHD1-205ENST00000581383 DUSP5Q16690 384 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 TMEM30BQ3MIR4 351 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 KRT71Q3SY84 523 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 ZNF789Q5FWF6 425 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 ADAMTSL4-AS1Q5T5F5 129 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 LRRC38Q5VT99 294 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 SIAH3Q8IW03 269 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 KLHDC8AQ8IYD2 350 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 CARNMT1Q8N4J0 409 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 SMYD1Q8NB12 490 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 ZNF485Q8NCK3 441 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 ZNF248Q8NDW4 579 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 SAP25Q8TEE9 199 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 KRT35Q92764 455 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 C2orf48Q96LS8 159 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 PANX3Q96QZ0 392 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 CLEC7AQ9BXN2 247 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 DPEP2Q9H4A9 486 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms