RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PRAMEF10O60809 474 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 ULK1O75385 1050 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 CHEK2O96017 543 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 HBQ1P09105 142 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 JMJD7P0C870 316 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 TSPAN8P19075 237 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 HMOX2P30519 316 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 ARL1P40616 181 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-203ENST00000580986 MDH1P40925 334 aaKnown RBP9.92□□□□□ -0.82
CCDC47-203ENST00000580986 ATP1A2P50993 1020 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 ARSFP54793 590 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 ARF3P61204 181 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-203ENST00000580986 STXBP1P61764 594 aaKnown RBP9.92□□□□□ -0.82
CCDC47-203ENST00000580986 SKP1P63208 163 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 MEF2AQ02078 507 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-203ENST00000580986 RTP5Q14D33 572 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 UGT3A2Q3SY77 523 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 TMEM35AQ53FP2 167 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 DCAF12Q5T6F0 453 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 TMEM164Q5U3C3 297 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 RHBDD2Q6NTF9 364 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 TMEM214Q6NUQ4 689 aaKnown RBP9.92□□□□□ -0.82
CCDC47-203ENST00000580986 ATG14Q6ZNE5 492 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 VN1R5Q7Z5H4 357 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 MYLK4Q86YV6 388 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-203ENST00000580986 LRRC34Q8IZ02 419 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 CDYL2Q8N8U2 506 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 HUS1BQ8NHY5 278 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 SLC13A3Q8WWT9 602 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 STON2Q8WXE9 905 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 MOCOSQ96EN8 888 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 CMTM7Q96FZ5 175 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 LRFN5Q96NI6 719 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 CDK15Q96Q40 435 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 OR6C1Q96RD1 312 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 TAAR9Q96RI9 348 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 MS4A8Q9BY19 250 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 FAM117AQ9C073 453 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 C20orf27Q9GZN8 174 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 KLHL25Q9H0H3 589 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 ELOVL6Q9H5J4 265 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 POLR1BQ9H9Y6 1135 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 DMRT3Q9NQL9 472 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 OCIAD1Q9NX40 245 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 TRAF6Q9Y4K3 522 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 NEUROG3Q9Y4Z2 214 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 PCDHGA7Q9Y5G6 932 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 LOC105369274A0A096LPK9 316 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 LOC102723532A0A0G2JNH3 316 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 A0A1W2PNU3 283 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 LRIT2A6NDA9 550 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 MANBAO00462 879 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 NVLO15381 856 aaKnown RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 NDUFS4O43181 175 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 HCRTR1O43613 425 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 ITM2AO43736 263 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 OR2B3O76000 313 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 TBX6O95947 436 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 ONECUT2O95948 504 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SMIM10L1P0DMW3 83 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 CCL4P13236 92 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 PRPH2P23942 346 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 PTX3P26022 381 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 CD82P27701 267 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 RPL14P50914 215 aaKnown RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 VSX2P58304 361 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 CYP4F3Q08477 520 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 HYAL2Q12891 473 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 MAP7Q14244 749 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 KCNAB1Q14722 419 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 HERC3Q15034 1050 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 RBBP5Q15291 538 aaKnown RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 GPR19Q15760 415 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 NDUFA9Q16795 377 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 MUM1Q2TAK8 710 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 DEFB110Q30KQ9 67 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SH2D4BQ5SQS7 431 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 WASHC2DQ5SRD0 308 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 CHSY3Q70JA7 882 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 ABHD13Q7L211 337 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 PLD3Q8IV08 490 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 OR4N4Q8N0Y3 316 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 CSNK1A1LQ8N752 337 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 ZNF781Q8N8C0 355 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 TTC29Q8NA56 475 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 OR2L5Q8NG80 312 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 OR1L3Q8NH93 324 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 PIWIL2Q8TC59 973 aaKnown RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 PROKR1Q8TCW9 393 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SELENOMQ8WWX9 145 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 GAL3ST3Q96A11 431 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 PRR11Q96HE9 360 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SMIM10Q96HG1 83 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SERPINI1Q99574 410 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 DPH2Q9BQC3 489 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 CENPKQ9BS16 269 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SYNPO2LQ9H987 977 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 TNFRSF12AQ9NP84 129 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 ACSS2Q9NR19 701 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms