RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 FHP07954 510 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 ALOX12P18054 663 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 EEF1DP29692 281 aaKnown RBP12.8□□□□□ -0.36
PGAP3-207ENST00000580898 OR4D2P58180 307 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 ILF2Q12905 390 aaKnown RBP12.8□□□□□ -0.36
PGAP3-207ENST00000580898 MORF4L2Q15014 288 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 PHKG1Q16816 387 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 SFT2D3Q587I9 215 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 HECTD2Q5U5R9 776 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 RPTNQ6XPR3 784 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 LGI4Q8N135 537 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 BEST3Q8N1M1 668 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 ARMC2Q8NEN0 867 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 OR56A3Q8NH54 315 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 SLC5A11Q8WWX8 675 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 MARVELD3Q96A59 401 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 TBC1D20Q96BZ9 403 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 MOCOSQ96EN8 888 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 PEX11GQ96HA9 241 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 MAGED4Q96JG8 741 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 DDX47Q9H0S4 455 aaKnown RBP12.8□□□□□ -0.36
PGAP3-207ENST00000580898 SH2B3Q9UQQ2 575 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 VWA7Q9Y334 891 aa12.8□□□□□ -0.36
PGAP3-207ENST00000580898 KLF2Q9Y5W3 355 aaPredicted RBP12.8□□□□□ -0.36
PGAP3-207ENST00000580898 PSMD12O00232 456 aaPredicted RBP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 CCL21O00585 134 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 NDC80O14777 642 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 GALR3O60755 368 aaPredicted RBP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 CDC123O75794 336 aaPredicted RBP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 GUCA1CO95843 209 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 GABRB3P28472 473 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 AHRP35869 848 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 CA7P43166 264 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 EFNA3P52797 238 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 TIAL1Q01085 375 aaKnown RBP eCLIP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 RHAGQ02094 409 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 OC90Q02509 493 aaPredicted RBP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 ART3Q13508 389 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 TUBA3CQ13748 450 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 OR1C1Q15619 314 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 KRTCAP3Q53RY4 240 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 TEDDM1Q5T9Z0 273 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 TUBA3EQ6PEY2 450 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 PDSS2Q86YH6 399 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 ZNF808Q8N4W9 903 aaPredicted RBP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 AFAP1L2Q8N4X5 818 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 NKAPQ8N5F7 415 aaKnown RBP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 ZNF740Q8NDX6 193 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 TRPV3Q8NET8 790 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 OR4K1Q8NGD4 311 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 NT5CQ8TCD5 201 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 PYCR2Q96C36 320 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 CFAP36Q96G28 342 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 PDLIM5Q96HC4 596 aaKnown RBP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 AIF1LQ9BQI0 150 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 RBCK1Q9BYM8 510 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 PELI2Q9HAT8 420 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 ZFATQ9P243 1243 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 ZFP69BQ9UJL9 534 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 UTP20O75691 2785 aaKnown RBP12.79□□□□□ -0.36
PGAP3-207ENST00000580898 DOPEY1Q5JWR5 2465 aa12.79□□□□□ -0.36
PGAP3-207ENST00000580898 HIVEP3Q5T1R4 2406 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 ARHGAP10A1A4S6 786 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 ZNF860A6NHJ4 632 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 GABRR3A8MPY1 467 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 BANF1O75531 89 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 TSPAN12O95859 305 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 ESRRAP11474 423 aaPredicted RBP12.78□□□□□ -0.36
PGAP3-207ENST00000580898 ARL4CP56559 192 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 ALDH6A1Q02252 535 aaKnown RBP12.78□□□□□ -0.36
PGAP3-207ENST00000580898 USP10Q14694 798 aaKnown RBP12.78□□□□□ -0.36
PGAP3-207ENST00000580898 DEFB134Q4QY38 66 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 FCRLBQ6BAA4 426 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 SP5Q6BEB4 398 aaPredicted RBP12.78□□□□□ -0.36
PGAP3-207ENST00000580898 CRLF3Q8IUI8 442 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 ANKRD7Q92527 254 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 VPS39Q96JC1 886 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 LANCL2Q9NS86 450 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 NSMCE4AQ9NXX6 385 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 CHMP2BQ9UQN3 213 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 KCNE2Q9Y6J6 123 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 CPAMD8Q8IZJ3 1885 aa12.78□□□□□ -0.36
PGAP3-207ENST00000580898 MDC1Q14676 2089 aaKnown RBP12.77□□□□□ -0.36
PGAP3-207ENST00000580898 HEATR5BQ9P2D3 2071 aa12.77□□□□□ -0.36
PGAP3-207ENST00000580898 PRRC2CQ9Y520 2896 aaKnown RBP12.77□□□□□ -0.36
PGAP3-207ENST00000580898 FAM227AF5H4B4 570 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 FCHO1O14526 889 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 CHST10O43529 356 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 PRMT3O60678 531 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 SLC19A2O60779 497 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 ZNF888P0CJ79 500 aaPredicted RBP12.77□□□□□ -0.37
PGAP3-207ENST00000580898 MST1P26927 711 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.37
PGAP3-207ENST00000580898 CD96P40200 585 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 ELK3P41970 407 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 SCTRP47872 440 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 HNMTP50135 292 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 SMSP52788 366 aa12.77□□□□□ -0.37
PGAP3-207ENST00000580898 SLC26A5P58743 744 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms