RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 EEF1A2Q05639 463 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 RGS1Q08116 209 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 CSHL1Q14406 222 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 SYT16Q17RD7 645 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 KCTD19Q17RG1 926 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 ABHD13Q7L211 337 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 ANKRD37Q7Z713 158 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 ADAMTSL2Q86TH1 951 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 ZC3HC1Q86WB0 502 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 PDSS2Q86YH6 399 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 KCT2Q8NC54 265 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 CATSPER1Q8NEC5 780 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 TTLQ8NG68 377 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 SLC5A11Q8WWX8 675 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 TBC1D20Q96BZ9 403 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 VPS39Q96JC1 886 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 CNDP1Q96KN2 507 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 WDR83Q9BRX9 315 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 CAPS2Q9BXY5 557 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 KCNF1Q9H3M0 494 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 STMN3Q9NZ72 180 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 ZFATQ9P243 1243 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 SH2B3Q9UQQ2 575 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 KCNE2Q9Y6J6 123 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 EIF3HO15372 352 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 JRKO75564 520 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 WDPCPO95876 746 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 SERPINA6P08185 405 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 SMIM10L1P0DMW3 83 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 IL1RNP18510 177 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 PAFAH1B1P43034 410 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 MAT1AQ00266 395 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 REEP5Q00765 189 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 MEP1AQ16819 746 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 MINDY4Q4G0A6 757 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 MTFR2Q6P444 385 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 TRMT10BQ6PF06 316 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 MBOAT1Q6ZNC8 495 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 QSOX2Q6ZRP7 698 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 SIRT6Q8N6T7 355 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 ZNF740Q8NDX6 193 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 NEIL2Q969S2 332 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 SMIM10Q96HG1 83 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 TAAR6Q96RI8 345 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 LPAR4Q99677 370 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 NAPGQ99747 312 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 OLFM1Q99784 485 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 AIF1LQ9BQI0 150 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 SLC6A16Q9GZN6 736 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 RHOJQ9H4E5 214 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 EHD1Q9H4M9 534 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 TRIM45Q9H8W5 580 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 PPANQ9NQ55 473 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 NAALAD2Q9Y3Q0 740 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 OARD1Q9Y530 152 aa13.66□□□□□ -0.22
SMARCE1-216ENST00000580419 APCP25054 2843 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 FEZF1A0PJY2 475 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 SGK494L7N484 410 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 OR1F1O43749 312 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 RASAL1O95294 804 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 MLYCDO95822 493 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 CLDN1O95832 211 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 FHP07954 510 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 F7P08709 466 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 GGT5P36269 586 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 ITGA8P53708 1063 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 SNRPNP63162 240 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 POU4F1Q01851 419 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 TERF2Q15554 542 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 NSDHLQ15738 373 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 ACER2Q5QJU3 275 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 PRSS41Q7RTY9 318 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 TCAIMQ8N3R3 496 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 SLC5A8Q8N695 610 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 HORMAD2Q8N7B1 307 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 ELP5Q8TE02 316 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 THAP3Q8WTV1 239 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 NT5DC2Q9H857 520 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 GPRC5BQ9NZH0 403 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 CHMP2BQ9UQN3 213 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 PKDREJQ9NTG1 2253 aa13.65□□□□□ -0.22
SMARCE1-216ENST00000580419 NCOA6Q14686 2063 aaPredicted RBP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 ASPDHA6ND91 283 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 FFAR3O14843 346 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 GPR42O15529 346 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 NDUFS4O43181 175 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 BANF1O75531 89 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 WISP3O95389 354 aaPredicted RBP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 GSTA2P09210 222 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 GNAZP19086 355 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 USP10Q14694 798 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 ABRAXAS2Q15018 415 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 ZRSR2Q15696 482 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 BTBD16Q32M84 506 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 KRTCAP3Q53RY4 240 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 NXPE4Q6UWF7 544 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 TMEM207Q6UWW9 146 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms