RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ALG9Q9H6U8 611 aa23.56■■□□□ 1.36
CDC42EP4-205ENST00000580315 ANKHQ9HCJ1 492 aa23.56■■□□□ 1.36
CDC42EP4-205ENST00000580315 ATP13A2Q9NQ11 1180 aa23.56■■□□□ 1.36
CDC42EP4-205ENST00000580315 GPR83Q9NYM4 423 aa23.56■■□□□ 1.36
CDC42EP4-205ENST00000580315 ZFP69BQ9UJL9 534 aa23.56■■□□□ 1.36
CDC42EP4-205ENST00000580315 C3orf18Q9UK00 162 aa23.56■■□□□ 1.36
CDC42EP4-205ENST00000580315 MRPS2Q9Y399 296 aaKnown RBP23.56■■□□□ 1.36
CDC42EP4-205ENST00000580315 FER1L5A0AVI2 2057 aa23.56■■□□□ 1.36
CDC42EP4-205ENST00000580315 H2AFYO75367 372 aaKnown RBP23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 SERPIND1P05546 499 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 TFEBP19484 476 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 CXCR2P25025 360 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 AHRP35869 848 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 GGT5P36269 586 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 GDF5P43026 501 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 SCTRP47872 440 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 SERPINB8P50452 374 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 REEP5Q00765 189 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 CDC16Q13042 620 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 MRPL49Q13405 166 aaKnown RBP23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 C18orf21Q32NC0 220 aaPredicted RBP23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 SLC6A19Q695T7 634 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 TAOK1Q7L7X3 1001 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 KCT2Q8NC54 265 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 PDPRQ8NCN5 879 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 EXT2Q93063 718 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 TGIF2Q9GZN2 237 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 SNX15Q9NRS6 342 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 DNAJC11Q9NVH1 559 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 GPRC5BQ9NZH0 403 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 FBXL4Q9UKA2 621 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 NFU1Q9UMS0 254 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 HS3ST3B1Q9Y662 390 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 SLC22A7Q9Y694 548 aa23.55■■□□□ 1.36
CDC42EP4-205ENST00000580315 SOCS6O14544 535 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 STK16O75716 305 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 SKP1P63208 163 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 HERC3Q15034 1050 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 FAM83EQ2M2I3 478 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 TUBB8Q3ZCM7 444 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 GALNT16Q8N428 558 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 ZNF740Q8NDX6 193 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 TRPV3Q8NET8 790 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 PNPLA2Q96AD5 504 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 SMAD5Q99717 465 aaKnown RBP23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 IGSF5Q9NSI5 407 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 NUDT4Q9NZJ9 180 aa23.54■■□□□ 1.36
CDC42EP4-205ENST00000580315 HIVEP3Q5T1R4 2406 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 A0A087WUV0 522 aaPredicted RBP23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 A1L4Q6 167 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 FFAR3O14843 346 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 PCDH17O14917 1159 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 GPR42O15529 346 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 TAPBPO15533 448 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 C2P06681 752 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 HEXBP07686 556 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 RHOXF2BP0C7M4 288 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 C1GALT1C1LP0DN25 315 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 IL1RNP18510 177 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 VARSP26640 1264 aaKnown RBP23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 TYK2P29597 1187 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 SERPINB9P50453 376 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 EMP2P54851 167 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 MAT1AQ00266 395 aaKnown RBP23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 DLG1Q12959 904 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 AIMP2Q13155 320 aaKnown RBP23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 RBBP5Q15291 538 aaKnown RBP23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 UBAP2Q5T6F2 1119 aaKnown RBP23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 NIPAL1Q6NVV3 410 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 KIRREL2Q6UWL6 708 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 ISCA2Q86U28 154 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 SLC44A1Q8WWI5 657 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 RHOXF2Q9BQY4 288 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 TMEM79Q9BSE2 394 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 SPNS1Q9H2V7 528 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 MAP10Q9P2G4 905 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 HEATR5BQ9P2D3 2071 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 DOPEY1Q5JWR5 2465 aa23.53■■□□□ 1.36
CDC42EP4-205ENST00000580315 CCDC189A1A4V9 331 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 URADA6NGE7 173 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 SYCE1LA8MT33 242 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 IDSB3KWA1 339 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 SUPT3HB4E1H0 165 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 MAP2K7O14733 419 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 CLGNO14967 610 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 KERAO60938 352 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 SUPT3HO75486 399 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 DDAH2O95865 285 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 ACPPP15309 386 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 GMPRP36959 345 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 MSH2P43246 934 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 HSPA7P48741 367 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 SYT16Q17RD7 645 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 ATG9BQ674R7 924 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 KLC3Q6P597 504 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 SLCO4C1Q6ZQN7 724 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 ABHD13Q7L211 337 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 KRT78Q8N1N4 520 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 SNX31Q8N9S9 440 aa23.52■■□□□ 1.36
CDC42EP4-205ENST00000580315 PRR7Q8TB68 274 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms