RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ADAMTS17Q8TE56 1095 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 KCTD4Q8WVF5 259 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 SLC44A1Q8WWI5 657 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 TM9SF4Q92544 642 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ATP6V1E2Q96A05 226 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 AGAP4Q96P64 663 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 PAFAH2Q99487 392 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 MFRPQ9BY79 579 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 CD244Q9BZW8 370 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF160Q9HCG1 818 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 C14orf105Q9NVL8 296 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 NUDT4Q9NZJ9 180 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 CPSF2Q9P2I0 782 aaKnown RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 OPTCQ9UBM4 332 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ANAPC2Q9UJX6 822 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF451Q9Y4E5 1061 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 SLC22A7Q9Y694 548 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 SPTBP11277 2137 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 FLNCQ14315 2725 aa6.21□□□□□ -1.41
TRAF4-213ENST00000578917 A0A088AWK7 358 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 NSG1A0A0A6YYJ2 146 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF860A6NHJ4 632 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 VSTM2BA6NLU5 285 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 A8MUI8 341 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 TRIM49D1C9J1S8 452 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 UBXN8O00124 270 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 TAPBPO15533 448 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 SUV39H1O43463 412 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 FOXS1O43638 330 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 DPM1O60762 260 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 B4GALT2O60909 372 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 KERAO60938 352 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 SMIM24O75264 130 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 RDH16O75452 317 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 CDC123O75794 336 aaPredicted RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 WFS1O76024 890 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 KLHL18O94889 574 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 KLHL2O95198 593 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 NSA2O95478 260 aaKnown RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 C1QAP02745 245 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 SNRPAP09012 282 aaKnown RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 RBP1P09455 135 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF888P0CJ79 500 aaPredicted RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 C8orf89P0DMQ9 161 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 PCNAP12004 261 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 ICAM2P13598 275 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF10P21506 573 aaPredicted RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 IL10P22301 178 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 GGT5P36269 586 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 GMPRP36959 345 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 XCR1P46094 333 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 GCGRP47871 477 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 SCTRP47872 440 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 KCNC1P48547 511 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 BTN3A2P78410 334 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 IRF9Q00978 393 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 TGM3Q08188 693 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 CHIT1Q13231 466 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 LAPTM5Q13571 262 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 DOC2AQ14183 400 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 MYBPC3Q14896 1274 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 NSDHLQ15738 373 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 TOR1AIP1Q5JTV8 583 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 ATG9BQ674R7 924 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 KIRREL2Q6UWL6 708 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 COX15Q7KZN9 410 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 NDUFAF7Q7L592 441 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 PRSS41Q7RTY9 318 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 LRRC70Q7Z2Q7 622 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 KBTBD2Q8IY47 623 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 CYP4X1Q8N118 509 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 ZADH2Q8N4Q0 377 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 TEX9Q8N6V9 391 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 EFCAB3Q8N7B9 438 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 AMER3Q8N944 861 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 FDCSPQ8NFU4 85 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 OR11G2Q8NGC1 345 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 UBLCP1Q8WVY7 318 aaPredicted RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 UBE2E3Q969T4 207 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 C8orf44Q96CB5 159 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 TM4SF19Q96DZ7 209 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 MOCOSQ96EN8 888 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 PTCD3Q96EY7 689 aaKnown RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 PEX11GQ96HA9 241 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 THOC3Q96J01 351 aaKnown RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 MAGEB10Q96LZ2 347 aaPredicted RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 SPSB2Q99619 263 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 EFCAB11Q9BUY7 163 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 PITHD1Q9GZP4 211 aaPredicted RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 ACTR8Q9H981 624 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 SLAMF7Q9NQ25 335 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 ENAMQ9NRM1 1142 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 IGSF5Q9NSI5 407 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 GPRC5BQ9NZH0 403 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 C19orf25Q9UFG5 118 aaPredicted RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 PTBP2Q9UKA9 531 aaKnown RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 MRPS2Q9Y399 296 aaKnown RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 PCDHGA9Q9Y5G4 932 aaKnown RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 TNPO3Q9Y5L0 923 aaKnown RBP6.21□□□□□ -1.42
TRAF4-213ENST00000578917 HS3ST3B1Q9Y662 390 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms