RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 OLR1P78380 273 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 UNC50Q53HI1 259 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 YOD1Q5VVQ6 348 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 MRPL14Q6P1L8 145 aaKnown RBP20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 IQCKQ8N0W5 287 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 NT5CQ8TCD5 201 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 COL26A1Q96A83 441 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 MMABQ96EY8 250 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 APOPT1Q96IL0 206 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 TMEM109Q9BVC6 243 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 RBCK1Q9BYM8 510 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 NLNQ9BYT8 704 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 DRC3Q9H069 523 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 SOX17Q9H6I2 414 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 IPPKQ9H8X2 491 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 ZNF304Q9HCX3 659 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 HCN3Q9P1Z3 774 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 SLC17A7Q9P2U7 560 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 GPN3Q9UHW5 284 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 RNF11Q9Y3C5 154 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 PTRH2Q9Y3E5 179 aaKnown RBP20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 PCDHGA6Q9Y5G7 932 aa20.61■□□□□ 0.89
CDC42EP4-203ENST00000578516 ZNF891A8MT65 544 aaPredicted RBP20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 RDH16O75452 317 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 WFS1O76024 890 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 PCNAP12004 261 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 CRHR1P34998 444 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 AHRP35869 848 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 CCR10P46092 362 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 EFNA3P52797 238 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 RPS15P62841 145 aaKnown RBP20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 TRAF3Q13114 568 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 DDX39BQ13838 428 aaKnown RBP20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 OR5T3Q8NGG3 340 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 ZNF483Q8TF39 744 aaPredicted RBP20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 CAPS2Q9BXY5 557 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 SLC6A16Q9GZN6 736 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 EHD1Q9H4M9 534 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 ACTR8Q9H981 624 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 DCDC2Q9UHG0 476 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 TCFL5Q9UL49 500 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 LOC400499M0QZD8 3231 aa20.6■□□□□ 0.89
CDC42EP4-203ENST00000578516 MASP2O00187 686 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 CTIFO43310 598 aaKnown RBP20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 JRKO75564 520 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 KLF7O75840 302 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 KLHL18O94889 574 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 UMODP07911 640 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 RAB40ALP0C0E4 278 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 ATP5F1P24539 256 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 ARL1P40616 181 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 E2F2Q14209 437 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 NKG7Q16617 165 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 VWA2Q5GFL6 755 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 GARNL3Q5VVW2 1013 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 GRHL2Q6ISB3 625 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 ZYG11AQ6WRX3 759 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 KRT78Q8N1N4 520 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 TBC1D19Q8N5T2 526 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 BANPQ8N9N5 519 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 UTP15Q8TED0 518 aaKnown RBP20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 SPSB2Q99619 263 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 DPH2Q9BQC3 489 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 EFCAB11Q9BUY7 163 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 YIPF2Q9BWQ6 316 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 CENPHQ9H3R5 247 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 COPG2Q9UBF2 871 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 KCND3Q9UK17 655 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 TMCO1Q9UM00 188 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 NAALAD2Q9Y3Q0 740 aa20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 TNPO3Q9Y5L0 923 aaKnown RBP20.59■□□□□ 0.89
CDC42EP4-203ENST00000578516 MGAQ8IWI9 3026 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 TXNDC9O14530 226 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 ERLIN1O75477 346 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 TAC1P20366 129 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 OTX2P32243 289 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 EMP3P54852 163 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 RGS1Q08116 209 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 TBCCQ15814 346 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 RBBP7Q16576 425 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 CPSF6Q16630 551 aaKnown RBP eCLIP20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 NDUFA9Q16795 377 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 DEFB134Q4QY38 66 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 ZNF678Q5SXM1 525 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 OVCH1Q7RTY7 1134 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 GPR155Q7Z3F1 870 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 LCA5Q86VQ0 697 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 CCDC63Q8NA47 563 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 ARMC2Q8NEN0 867 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 TRPC4APQ8TEL6 797 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 TRPC4Q9UBN4 977 aa20.58■□□□□ 0.89
CDC42EP4-203ENST00000578516 CACNA1GO43497 2377 aa20.57■□□□□ 0.88
CDC42EP4-203ENST00000578516 RGS16O15492 202 aaPredicted RBP20.57■□□□□ 0.88
CDC42EP4-203ENST00000578516 ONECUT2O95948 504 aa20.57■□□□□ 0.88
CDC42EP4-203ENST00000578516 MYL2P10916 166 aa20.57■□□□□ 0.88
CDC42EP4-203ENST00000578516 CXCR2P25025 360 aa20.57■□□□□ 0.88
CDC42EP4-203ENST00000578516 CASP2P42575 452 aa20.57■□□□□ 0.88
CDC42EP4-203ENST00000578516 HERVK_113P63132 956 aa20.57■□□□□ 0.88
CDC42EP4-203ENST00000578516 CHAF1BQ13112 559 aa20.57■□□□□ 0.88
CDC42EP4-203ENST00000578516 PWP1Q13610 501 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms