RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 RELAQ04206 551 aa13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 PRDX1Q06830 199 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 RGS9BPQ6ZS82 235 aa13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 PEX11GQ96HA9 241 aa13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 ANP32EQ9BTT0 268 aa13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 LANCL2Q9NS86 450 aa13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 DEPPQ9NTK1 212 aa13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 ALKBH4Q9NXW9 302 aa13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 R3HDM2Q9Y2K5 976 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 LIPGQ9Y5X9 500 aa13.15□□□□□ -0.3
PPP4R1-206ENST00000577779 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 PINLYPA6NC86 204 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 TRIM64A6NGJ6 449 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 TRIM64BA6NI03 449 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 SMPD2O60906 423 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 GOT2P00505 430 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 BMP5P22003 454 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 PPARGP37231 505 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 SLC1A1P43005 524 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 ZBED6P86452 979 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 CBLBQ13191 982 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 TYSND1Q2T9J0 566 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 CCDC38Q502W7 563 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 CATSPEREQ5SY80 951 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 CAPN12Q6ZSI9 719 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 SLC22A16Q86VW1 577 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 SLC13A5Q86YT5 568 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 ARMC10Q8N2F6 343 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 RELL2Q8NC24 303 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 OR9A1PQ8NGU1 263 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 ZCCHC10Q8TBK6 192 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 OR1F2PQ96R84 312 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 MACROD1Q9BQ69 325 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 YIPF4Q9BSR8 244 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 HEMGNQ9BXL5 484 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 ANKHQ9HCJ1 492 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 KCMF1Q9P0J7 381 aa13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 TSR3Q9UJK0 312 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-206ENST00000577779 FEZF1A0PJY2 475 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 HSPB2A8KAH6 182 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 APOC4-APOC2K7ER74 178 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 DVL2O14641 736 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 GOSR1O95249 250 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 IGHG3P01860 377 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 APOC2P02655 101 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 ERGP11308 486 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 COMTP21964 271 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 IL10P22301 178 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 CTNNA2P26232 953 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 POU4F3Q15319 338 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 HSPB2Q16082 182 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 FBXL19-AS1Q494R0 122 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 ANKRD20A4Q4UJ75 823 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 WLSQ5T9L3 541 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 CCDC181Q5TID7 509 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 PTRHD1Q6GMV3 140 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 HMBOX1Q6NT76 420 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 TMEM214Q6NUQ4 689 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 TRILQ7L0X0 811 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 OTOAQ7RTW8 1153 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 PDSS2Q86YH6 399 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 CDKL3Q8IVW4 592 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 PSD4Q8NDX1 1056 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 OR2M7Q8NG81 312 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 OR13J1Q8NGT2 312 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 OR4L1Q8NH43 312 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 EBNA1BP2Q99848 306 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 CNPPD1Q9BV87 410 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 TTTY12Q9BZ98 90 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 LRRC40Q9H9A6 602 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 ABCF3Q9NUQ8 709 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 MTRF1LQ9UGC7 380 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 FOXD3Q9UJU5 478 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 ERVK-11Q9UQG0 969 aa13.13□□□□□ -0.31
PPP4R1-206ENST00000577779 A0A1B0GVC2 190 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 ZNF860A6NHJ4 632 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 SAGE2PA6NJ88 616 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 AQP7O14520 342 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 KPNA5O15131 536 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 PSTPIP1O43586 416 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 KIF5CO60282 957 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 ITGA10O75578 1167 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 FHP07954 510 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 BMP7P18075 431 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 MAN2A2P49641 1150 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 ABATP80404 500 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 SEMA3AQ14563 771 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 FASTKD1Q53R41 847 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 KCTD11Q693B1 232 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 PRSS57Q6UWY2 283 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 BBS12Q6ZW61 710 aa13.12□□□□□ -0.31
PPP4R1-206ENST00000577779 VN1R4Q7Z5H5 301 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms