RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
COPS3-214ENST00000577246 NAALAD2Q9Y3Q0 740 aa12.53□□□□□ -0.4
COPS3-214ENST00000577246 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
COPS3-214ENST00000577246 CACNA1CQ13936 2221 aa12.53□□□□□ -0.4
COPS3-214ENST00000577246 GRID2IPA4D2P6 1211 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 OR2W5A6NFC9 320 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 LIASO43766 372 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 STATHP02808 62 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 FHP07954 510 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 ENO3P13929 434 aaPredicted RBP12.52□□□□□ -0.41
COPS3-214ENST00000577246 PAMP19021 973 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 OGNP20774 298 aaKnown RBP12.52□□□□□ -0.41
COPS3-214ENST00000577246 MLF1P58340 268 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 OASLQ15646 514 aaKnown RBP12.52□□□□□ -0.41
COPS3-214ENST00000577246 ZNF468Q5VIY5 522 aaPredicted RBP12.52□□□□□ -0.41
COPS3-214ENST00000577246 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 ASPGQ86U10 573 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 MMP21Q8N119 569 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 MARVELD2Q8N4S9 558 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 C16orf52Q8NHV5 167 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 SLC13A3Q8WWT9 602 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 ASB11Q8WXH4 323 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 ATG4AQ8WYN0 398 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 TBC1D20Q96BZ9 403 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 PEX11GQ96HA9 241 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 RBCK1Q9BYM8 510 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 UCK2Q9BZX2 261 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 SLC6A16Q9GZN6 736 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 LANCL2Q9NS86 450 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 DNAJB12Q9NXW2 375 aaKnown RBP12.52□□□□□ -0.41
COPS3-214ENST00000577246 CRYL1Q9Y2S2 319 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 EPN1Q9Y6I3 576 aaPredicted RBP12.52□□□□□ -0.41
COPS3-214ENST00000577246 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 PCNX1Q96RV3 2341 aa12.52□□□□□ -0.41
COPS3-214ENST00000577246 FAM237BA0A1B0GVD1 139 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 PEX1O43933 1283 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 HS6ST1O60243 411 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 MPC1LP0DKB6 136 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 FOSL1P15407 271 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 NMBRP28336 390 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
COPS3-214ENST00000577246 CRADDP78560 199 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 PMPCAQ10713 525 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 KCNJ11Q14654 390 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 RPS6KA1Q15418 735 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 CMPK2Q5EBM0 449 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 CAPN13Q6MZZ7 669 aaPredicted RBP12.51□□□□□ -0.41
COPS3-214ENST00000577246 C17orf64Q86WR6 236 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 SULF2Q8IWU5 870 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 ZFP62Q8NB50 900 aaPredicted RBP12.51□□□□□ -0.41
COPS3-214ENST00000577246 ARMC2Q8NEN0 867 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 OR5M3Q8NGP4 307 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 TSLPQ969D9 159 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 TM4SF19Q96DZ7 209 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 SEC16BQ96JE7 1060 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 KIFC1Q9BW19 673 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 DEFB126Q9BYW3 111 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 CCDC68Q9H2F9 335 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
COPS3-214ENST00000577246 CCM2LQ9NUG4 571 aaPredicted RBP12.51□□□□□ -0.41
COPS3-214ENST00000577246 INTS10Q9NVR2 710 aaKnown RBP12.51□□□□□ -0.41
COPS3-214ENST00000577246 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 SAGE2PA6NJ88 616 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 TMEM200CA6NKL6 621 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 FIGNL2A6NMB9 653 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 GFYI3L273 518 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 ACOT7O00154 380 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 KLK8O60259 260 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 CCND1P24385 295 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 ARNTP27540 789 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 IMPA1P29218 277 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 PEX19P40855 299 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 CLCN7P51798 805 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 TBPL1P62380 186 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 SNRPNP63162 240 aaKnown RBP12.5□□□□□ -0.41
COPS3-214ENST00000577246 SEL1L2Q5TEA6 688 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 ARMC3Q5W041 872 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 QSOX2Q6ZRP7 698 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 RGS9BPQ6ZS82 235 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 ZNF227Q86WZ6 799 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 PDSS2Q86YH6 399 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 LRRC56Q8IYG6 542 aaPredicted RBP12.5□□□□□ -0.41
COPS3-214ENST00000577246 CYP4X1Q8N118 509 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 CYP4Z2PQ8N1L4 340 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 ARMC10Q8N2F6 343 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 TBC1D19Q8N5T2 526 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 TMEM156Q8N614 296 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 KCT2Q8NC54 265 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 CREB3L4Q8TEY5 395 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 KCNJ9Q92806 393 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 MACROD1Q9BQ69 325 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 TSGA10Q9BZW7 698 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 TIMMDC1Q9NPL8 285 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 ST6GALNAC2Q9UJ37 374 aa12.5□□□□□ -0.41
COPS3-214ENST00000577246 FAM47E-STBD1D6RA91 191 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 EIF3FO00303 357 aaPredicted RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 TUBB4AP04350 444 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms