RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 HKDC1Q2TB90 917 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 TECRLQ5HYJ1 363 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 TMEM201Q5SNT2 666 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 THEMIS2Q5TEJ8 643 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 SH2D5Q6ZV89 423 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 VN1R4Q7Z5H5 301 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 ADAMTSL2Q86TH1 951 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 THOC6Q86W42 341 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 GPSM1Q86YR5 675 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 KLHDC8AQ8IYD2 350 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 CACNA2D3Q8IZS8 1091 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 ARHGEF39Q8N4T4 335 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 RAB42Q8N4Z0 105 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 PDPRQ8NCN5 879 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 CAVIN3Q969G5 261 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 NEIL2Q969S2 332 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 SLC22A18Q96BI1 424 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 TEFMQ96QE5 360 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 OR2A5Q96R48 311 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 SSU72Q9NP77 194 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 MRPS30Q9NP92 439 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 SLC22A11Q9NSA0 550 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 DHCR7Q9UBM7 475 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 REV1Q9UBZ9 1251 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 IL17BQ9UHF5 180 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 ADAM30Q9UKF2 790 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 SLC22A14Q9Y267 594 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 MRPS2Q9Y399 296 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 ZFYVE26Q68DK2 2539 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 CFAP46Q8IYW2 2715 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 TARM1B6A8C7 271 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 E7EQ34 232 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 H0YGG7 62 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 KERAO60938 352 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 CNOT3O75175 753 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 OR2B3O76000 313 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 SNRPAP09012 282 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 HIST1H2AGP0C0S8 130 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 HIST1H2ADP20671 130 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 GGT5P36269 586 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 SLC26A3P40879 764 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 BCL6P41182 706 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 STAT5AP42229 794 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 HSPA7P48741 367 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ITGA1P56199 1179 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ARF3P61204 181 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 RPS18P62269 152 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 CYP4F2P78329 520 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 TMTC4Q5T4D3 741 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 C1orf189Q5VU69 101 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ADNP2Q6IQ32 1131 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 LCTLQ6UWM7 567 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 SEZ6L2Q6UXD5 910 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ZNF517Q6ZMY9 492 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 TIFABQ6ZNK6 161 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 FRA10AC1Q70Z53 315 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 TBC1D1Q86TI0 1168 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ZNF655Q8N720 491 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 OR4K1Q8NGD4 311 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 CT55Q8WUE5 264 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ZUFSPQ96AP4 578 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 MOCOSQ96EN8 888 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 HIST1H2AHQ96KK5 128 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 C10orf90Q96M02 699 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 HIST1H2AJQ99878 128 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 EGFL8Q99944 293 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ZPBPQ9BS86 351 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 H2AFJQ9BTM1 129 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 C12orf65Q9H3J6 166 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ACSS2Q9NR19 701 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 FETUBQ9UGM5 382 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 PTBP2Q9UKA9 531 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 RNF112Q9ULX5 631 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 PLCL2Q9UPR0 1127 aa9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 URB1O60287 2271 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-219ENST00000576713 ZNF839A8K0R7 811 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 KRT38O76015 456 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 WDR47O94967 919 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 SIX3O95343 332 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 ANXA5P08758 320 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 FURINP09958 794 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 NUDT17P0C025 328 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 CD22P20273 847 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 CD82P27701 267 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 ILF2Q12905 390 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 SLBPQ14493 270 aaKnown RBP eCLIP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 SLC9A5Q14940 896 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 NKG7Q16617 165 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 PRTGQ2VWP7 1150 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 WASHC2DQ5SRD0 308 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 ATP1A1-AS1Q5TC04 95 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 CAPN13Q6MZZ7 669 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 FAM198BQ6UWH4 519 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 C6orf15Q6UXA7 325 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 RPS27LQ71UM5 84 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 COX15Q7KZN9 410 aa9.02□□□□□ -0.97
NPLOC4-219ENST00000576713 PRSS41Q7RTY9 318 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms