RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 AGAP11Q8TF27 550 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 C10orf90Q96M02 699 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 SPRY4Q9C004 299 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 MID1IP1Q9NPA3 183 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 DHCR7Q9UBM7 475 aaKnown RBP13.32□□□□□ -0.28
RPAIN-217ENST00000575711 NDOR1Q9UHB4 597 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 A0A1B0GTL3 188 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 TEX51A0A1B0GUA7 166 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 MEN1O00255 615 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 FFAR3O14843 346 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 GPR42O15529 346 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 CRCPO75575 148 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ESRRBO95718 433 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ENO1P06733 434 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 RORAP35398 523 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 PIK3CBP42338 1070 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ATP1A2P50993 1020 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 WDR4P57081 412 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 STXBP1P61764 594 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 IFT88Q13099 833 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 GPS2Q13227 327 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 DDX39BQ13838 428 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 RCN2Q14257 317 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 CHI3L2Q15782 390 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 C10orf62Q5T681 223 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 C1orf189Q5VU69 101 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ADNP2Q6IQ32 1131 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 TMEM214Q6NUQ4 689 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 TIPARPQ7Z3E1 657 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 VN1R5Q7Z5H4 357 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 DSELQ8IZU8 1212 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 CDYL2Q8N8U2 506 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF248Q8NDW4 579 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 HUS1BQ8NHY5 278 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 SNIP1Q8TAD8 396 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ZCCHC10Q8TBK6 192 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF473Q8WTR7 871 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 MR1Q95460 341 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 MVB12AQ96EY5 273 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 DPH2Q9BQC3 489 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 SLC29A3Q9BZD2 475 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 SLC6A16Q9GZN6 736 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ELOVL6Q9H5J4 265 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 EML4Q9HC35 981 aaKnown RBP13.31□□□□□ -0.28
RPAIN-217ENST00000575711 LHX9Q9NQ69 397 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF225Q9UK10 706 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 PADI1Q9ULC6 663 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 SNX6Q9UNH7 406 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 TSC22D4Q9Y3Q8 395 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 HEATR5BQ9P2D3 2071 aa13.31□□□□□ -0.28
RPAIN-217ENST00000575711 TMEM8BA6NDV4 472 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 UBFD1O14562 309 aaKnown RBP13.3□□□□□ -0.28
RPAIN-217ENST00000575711 TLX3O43711 291 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-217ENST00000575711 KRT6AP02538 564 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 KRT6BP04259 564 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 SERPINE1P05121 402 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 CAPN1P07384 714 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 HMOX2P30519 316 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 CCR10P46092 362 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 KRT6CP48668 564 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 PPP2R2AP63151 447 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 DCDP81605 110 aaKnown RBP13.3□□□□□ -0.28
RPAIN-217ENST00000575711 ABHD18Q0P651 414 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 COL9A2Q14055 689 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-217ENST00000575711 FAM53BQ14153 422 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 HERC3Q15034 1050 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 TOR1AIP1Q5JTV8 583 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 FRG2Q64ET8 278 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 PRMT9Q6P2P2 845 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 ABHD13Q7L211 337 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 DTX1Q86Y01 620 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 CACNA2D3Q8IZS8 1091 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 ARHGEF39Q8N4T4 335 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 IL22RA1Q8N6P7 574 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 WDR20Q8TBZ3 569 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 METTL6Q8TCB7 284 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 KCNE4Q8WWG9 221 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 CMTM7Q96FZ5 175 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 GBP5Q96PP8 586 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 FRG2BQ96QU4 278 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 MTERF1Q99551 399 aaKnown RBP13.3□□□□□ -0.28
RPAIN-217ENST00000575711 SHCBP1LQ9BZQ2 653 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 REXO4Q9GZR2 422 aaKnown RBP13.3□□□□□ -0.28
RPAIN-217ENST00000575711 ANKHQ9HCJ1 492 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 MED4Q9NPJ6 270 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 DMRT3Q9NQL9 472 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 WDR70Q9NW82 654 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 CDC14AQ9UNH5 594 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 SLC22A7Q9Y694 548 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 WDFY3Q8IZQ1 3526 aa13.3□□□□□ -0.28
RPAIN-217ENST00000575711 LRIT2A6NDA9 550 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 FOXE1O00358 373 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 MED26O95402 600 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 TGFB1P01137 390 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 CHRNGP07510 517 aa13.29□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF888P0CJ79 500 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 PIM1P11309 404 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-217ENST00000575711 ALOX12P18054 663 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms