RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SNRPNP63162 240 aaKnown RBP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 MAT1AQ00266 395 aaKnown RBP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 REEP5Q00765 189 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 C19orf57Q0VDD7 668 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 CDC16Q13042 620 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 DSG2Q14126 1118 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 SYT16Q17RD7 645 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 FAM83EQ2M2I3 478 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 NXPE4Q6UWF7 544 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 CCDC91Q7Z6B0 441 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 MTERF4Q7Z6M4 381 aaKnown RBP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 ISCA2Q86U28 154 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 APLFQ8IW19 511 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 SRRM1Q8IYB3 904 aaKnown RBP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 CENPLQ8N0S6 344 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 CYP4X1Q8N118 509 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 ARHGEF39Q8N4T4 335 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 SNX31Q8N9S9 440 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 KCT2Q8NC54 265 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 PDPRQ8NCN5 879 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 OR4K1Q8NGD4 311 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 OR9A4Q8NGU2 314 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 ARL8AQ96BM9 186 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 MIEF2Q96C03 454 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 ABHD17AQ96GS6 310 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 AIF1LQ9BQI0 150 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 SLC25A18Q9H1K4 315 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 SLC26A1Q9H2B4 701 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 NUDT4Q9NZJ9 180 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 TRPC4Q9UBN4 977 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 TUBD1Q9UJT1 453 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 NXT1Q9UKK6 140 aaKnown RBP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 PCSK5Q92824 1860 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 BSNQ9UPA5 3926 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 CCNT2O60583 730 aaKnown RBP12.58□□□□□ -0.4
RPAIN-216ENST00000575599 STK16O75716 305 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 IPO13O94829 963 aaKnown RBP12.58□□□□□ -0.4
RPAIN-216ENST00000575599 ZGLP1P0C6A0 271 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 GNAZP19086 355 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 SLC26A3P40879 764 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 AVPR1BP47901 424 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 CCL11P51671 97 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 MAGOHP61326 146 aaKnown RBP12.58□□□□□ -0.4
RPAIN-216ENST00000575599 FAM53BQ14153 422 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 RBBP5Q15291 538 aaKnown RBP12.58□□□□□ -0.4
RPAIN-216ENST00000575599 VWA2Q5GFL6 755 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 CDKL4Q5MAI5 379 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 TMEM214Q6NUQ4 689 aaKnown RBP12.58□□□□□ -0.4
RPAIN-216ENST00000575599 KLC3Q6P597 504 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 TIFABQ6ZNK6 161 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 PRSS41Q7RTY9 318 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 PPP1R32Q7Z5V6 425 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 KLHDC8AQ8IYD2 350 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 AMER3Q8N944 861 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 STT3BQ8TCJ2 826 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 TM4SF19Q96DZ7 209 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 MOCOSQ96EN8 888 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 ATOH8Q96SQ7 321 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 CRB3Q9BUF7 120 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 IQCGQ9H095 443 aaKnown RBP12.58□□□□□ -0.4
RPAIN-216ENST00000575599 DNAJC11Q9NVH1 559 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 P4HTMQ9NXG6 502 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 TP53TG5Q9Y2B4 290 aa12.58□□□□□ -0.4
RPAIN-216ENST00000575599 A6NL46 340 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 VSTM2BA6NLU5 285 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 GOLGA8RI6L899 631 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 KLHL2O95198 593 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 KRT4P19013 534 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 NR1D1P20393 614 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 GGT5P36269 586 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 SCTRP47872 440 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 CSRP3P50461 194 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 RRADP55042 308 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 KLC1Q07866 573 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 RGS1Q08116 209 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 SLBPQ14493 270 aaKnown RBP eCLIP12.57□□□□□ -0.4
RPAIN-216ENST00000575599 RBBP7Q16576 425 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 PDK4Q16654 411 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 LACTB2Q53H82 288 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-216ENST00000575599 TTMPQ5BVD1 217 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 SLCO4C1Q6ZQN7 724 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 MED25Q71SY5 747 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 TRABD2AQ86V40 505 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 PTRH1Q86Y79 214 aaKnown RBP12.57□□□□□ -0.4
RPAIN-216ENST00000575599 TMEM102Q8N9M5 508 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-216ENST00000575599 ACMSDQ8TDX5 336 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 IP6K3Q96PC2 410 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 SARGQ9BW04 601 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 ANKHQ9HCJ1 492 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 KCNK9Q9NPC2 374 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 GPRC5BQ9NZH0 403 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 HCN3Q9P1Z3 774 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 ZFP69BQ9UJL9 534 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 PTBP2Q9UKA9 531 aaKnown RBP12.57□□□□□ -0.4
RPAIN-216ENST00000575599 MAP4K5Q9Y4K4 846 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 ASB1Q9Y576 335 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 ACTL7BQ9Y614 415 aa12.57□□□□□ -0.4
RPAIN-216ENST00000575599 A0A1W2PPM1 405 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 C2orf72A6NCS6 295 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ZNF860A6NHJ4 632 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms