RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 UTP23Q9BRU9 249 aaKnown RBP14.33□□□□□ -0.12
CTNS-209ENST00000574776 HAUS8Q9BT25 410 aa14.33□□□□□ -0.12
CTNS-209ENST00000574776 HES7Q9BYE0 225 aa14.33□□□□□ -0.12
CTNS-209ENST00000574776 FAM129AQ9BZQ8 928 aa14.33□□□□□ -0.12
CTNS-209ENST00000574776 KLHL1Q9NR64 748 aa14.33□□□□□ -0.12
CTNS-209ENST00000574776 ARL15Q9NXU5 204 aa14.33□□□□□ -0.12
CTNS-209ENST00000574776 SUCOQ9UBS9 1254 aaKnown RBP14.33□□□□□ -0.12
CTNS-209ENST00000574776 APCP25054 2843 aa14.33□□□□□ -0.12
CTNS-209ENST00000574776 TTI1O43156 1089 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 TSPAN12O95859 305 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 B3GALT4O96024 378 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 SERPIND1P05546 499 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 IL10P22301 178 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 CA7P43166 264 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 FNTAP49354 379 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 IL2P60568 153 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 RBPJQ06330 500 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.32□□□□□ -0.12
CTNS-209ENST00000574776 SPANXN3Q5MJ09 141 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 DUPD1Q68J44 220 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 PAPD4Q6PIY7 484 aaKnown RBP14.32□□□□□ -0.12
CTNS-209ENST00000574776 MCEMP1Q8IX19 187 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 ZNF740Q8NDX6 193 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 MDS2Q8NDY4 140 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 ABHD11Q8NFV4 315 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 OR4K1Q8NGD4 311 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 GABPB2Q8TAK5 448 aaPredicted RBP14.32□□□□□ -0.12
CTNS-209ENST00000574776 ACTRT1Q8TDG2 376 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 TSLPQ969D9 159 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 OR4K3Q96R72 315 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 OSBPL9Q96SU4 736 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 LPAR4Q99677 370 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 TRIM54Q9BYV2 358 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 MMP25Q9NPA2 562 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 PPANQ9NQ55 473 aaKnown RBP14.32□□□□□ -0.12
CTNS-209ENST00000574776 LANCL2Q9NS86 450 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 SLC17A6Q9P2U8 582 aa14.32□□□□□ -0.12
CTNS-209ENST00000574776 MAGEB17A8MXT2 336 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 FAM227AF5H4B4 570 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 NDUFS4O43181 175 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 CHST10O43529 356 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 NRDCO43847 1150 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 TTC4O95801 387 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 GUCA1CO95843 209 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 OR4D2P58180 307 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 OLR1P78380 273 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
CTNS-209ENST00000574776 USP10Q14694 798 aaKnown RBP14.31□□□□□ -0.12
CTNS-209ENST00000574776 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
CTNS-209ENST00000574776 HERC3Q15034 1050 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 OR1C1Q15619 314 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 BBS9Q3SYG4 887 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 DEFB134Q4QY38 66 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 HP1BP3Q5SSJ5 553 aaPredicted RBP14.31□□□□□ -0.12
CTNS-209ENST00000574776 CATSPEREQ5SY80 951 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 AFAP1L2Q8N4X5 818 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 OR56A3Q8NH54 315 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 OR1F2PQ96R84 312 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 TSPAN10Q9H1Z9 355 aaPredicted RBP14.31□□□□□ -0.12
CTNS-209ENST00000574776 CDCP1Q9H5V8 836 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 ASIC3Q9UHC3 531 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 VWA7Q9Y334 891 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 PCDHGB6Q9Y5F9 930 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 KLF2Q9Y5W3 355 aaPredicted RBP14.31□□□□□ -0.12
CTNS-209ENST00000574776 CSMD1Q96PZ7 3565 aa14.31□□□□□ -0.12
CTNS-209ENST00000574776 GOLGA6L10A0A0M3HER8 536 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 TRBC2A0A5B9 178 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 PABPN1LA6NDY0 278 aaKnown RBP14.3□□□□□ -0.12
CTNS-209ENST00000574776 DNALI1O14645 258 aaPredicted RBP14.3□□□□□ -0.12
CTNS-209ENST00000574776 GALR3O60755 368 aaPredicted RBP14.3□□□□□ -0.12
CTNS-209ENST00000574776 SLC19A2O60779 497 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 B4GALT2O60909 372 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 FHP07954 510 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 CD46P15529 392 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 ALOX12P18054 663 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 HTR1EP28566 365 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 EEF1DP29692 281 aaKnown RBP14.3□□□□□ -0.12
CTNS-209ENST00000574776 SLC26A5P58743 744 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 OC90Q02509 493 aaPredicted RBP14.3□□□□□ -0.12
CTNS-209ENST00000574776 PWP1Q13610 501 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 CSHL1Q14406 222 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 C3AR1Q16581 482 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 TEDDM1Q5T9Z0 273 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 HECTD2Q5U5R9 776 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 MTFR2Q6P444 385 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 KIAA0408Q6ZU52 694 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 CNTN4Q8IWV2 1026 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 SLC35F6Q8N357 371 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 ZNF808Q8N4W9 903 aaPredicted RBP14.3□□□□□ -0.12
CTNS-209ENST00000574776 SLC5A8Q8N695 610 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 GPATCH11Q8N954 259 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 TBC1D20Q96BZ9 403 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 CERS2Q96G23 380 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 NAT9Q9BTE0 207 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 SARGQ9BW04 601 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 RUBCNLQ9H714 662 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 PLAC1Q9HBJ0 212 aa14.3□□□□□ -0.12
CTNS-209ENST00000574776 PKDREJQ9NTG1 2253 aa14.29□□□□□ -0.12
CTNS-209ENST00000574776 GABRR3A8MPY1 467 aa14.29□□□□□ -0.12
CTNS-209ENST00000574776 NPIPA5E9PKD4 350 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms