RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ADORA3P0DMS8 318 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 PLEKHS1Q5SXH7 462 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 USP45Q70EL2 814 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 NPAS3Q8IXF0 933 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 EFHD2Q96C19 240 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 MRPL9Q9BYD2 267 aaKnown RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 CAB39Q9Y376 341 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 PCDHGA3Q9Y5H0 932 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 ANXA4P09525 319 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 SRCP12931 536 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 IDSP22304 550 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 COX20Q5RI15 118 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 PNCKQ6P2M8 343 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF852Q6ZMS4 543 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 SYTL1Q8IYJ3 562 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 OR4C15Q8NGM1 316 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 FOXJ1Q92949 421 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 ECHDC3Q96DC8 303 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 SUV39H2Q9H5I1 410 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 GPATCH2Q9NW75 528 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 SLC6A14Q9UN76 642 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 A3GALT2U3KPV4 340 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 PRAMEF25A6NGN4 478 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 SNPHO15079 494 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 DNTTP04053 509 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 GABRB1P18505 474 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 LIMK1P53667 647 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 CYP4F2P78329 520 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 AKAP14Q86UN6 197 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 C11orf65Q8NCR3 313 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 ELMO1Q92556 727 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 MAGEB10Q96LZ2 347 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-206ENST00000573852 Q96MT0 163 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 RAD9AQ99638 391 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-206ENST00000573852 UGDHO60701 494 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 SPINT3P49223 89 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 CDH12P55289 794 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 ST3GAL4Q11206 333 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 VEPH1Q14D04 833 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 ARMCX4Q5H9R4 360 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF605Q86T29 641 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 FAM217AQ8IXS0 508 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 STX19Q8N4C7 294 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 UTP15Q8TED0 518 aaKnown RBP18.35■□□□□ 0.53
SCARF1-206ENST00000573852 MCCC1Q96RQ3 725 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-206ENST00000573852 CHCHD6Q9BRQ6 235 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 CEP44Q9C0F1 390 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 ITM2CQ9NQX7 267 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 TAS2R16Q9NYV7 291 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 PPIL1Q9Y3C6 166 aa18.35■□□□□ 0.53
SCARF1-206ENST00000573852 A0A1W2PQ45 241 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-206ENST00000573852 A0A1W2PQY0 241 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 ADAMDEC1O15204 470 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 ETFAP13804 333 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 CRATP43155 626 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 RGS6P49758 472 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 MVDP53602 400 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SPIBQ01892 262 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 PRKCDQ05655 676 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 EXOC3L2Q2M3D2 409 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 CYP27C1Q4G0S4 372 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.34■□□□□ 0.53
SCARF1-206ENST00000573852 DEPDC1Q5TB30 811 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 DESI1Q6ICB0 168 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 ANGPTL8Q6UXH0 198 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 HEATR4Q86WZ0 1026 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SLC7A5P1Q8MH63 180 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SLC43A3Q8NBI5 491 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 GPR156Q8NFN8 814 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 OR4A15Q8NGL6 344 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 COL21A1Q96P44 957 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SIAEQ9HAT2 523 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SGK2Q9HBY8 427 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 RNF186Q9NXI6 227 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SH3BP4Q9P0V3 963 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 TMEM202A6NGA9 273 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 ARHGEF33A8MVX0 844 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SGTAO43765 313 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 AOC2O75106 756 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SLC10A3P09131 477 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 PPIBP23284 216 aaKnown RBP18.34■□□□□ 0.53
SCARF1-206ENST00000573852 SNRPD1P62314 119 aaKnown RBP18.34■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF45Q02386 682 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF33BQ06732 778 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 NAE1Q13564 534 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 GPR162Q16538 588 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 CCSMST1Q4G0I0 132 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 CCDC92Q53HC0 331 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-206ENST00000573852 BBS7Q8IWZ6 715 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 LGI4Q8N135 537 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 METTL4Q8N3J2 472 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 VPS37AQ8NEZ2 397 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 COQ8BQ96D53 544 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 MED8Q96G25 268 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 OR4K3Q96R72 315 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 CTRCQ99895 268 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 BRD9Q9H8M2 597 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 STARD7Q9NQZ5 370 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms